Panicum hallii (Hall's panicgrass): 112896943
Help
Entry
112896943 CDS
T07366
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112896943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112896943
Membrane trafficking [BR:
phai04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112896943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
ATPase_2
AAA_14
AAA_5
AAA_22
ORC-CDC6-like
DUF815
RuvB_N
AAA_2
RNA_helicase
nSTAND3
TsaE
AAA_19
AAA_7
IstB_IS21
AAA_28
AAA_33
Mg_chelatase
bpMoxR
RNA12
AAA_11
Rad17
Motif
Other DBs
NCBI-GeneID:
112896943
NCBI-ProteinID:
XP_025820850
LinkDB
All DBs
Position
6:45064122..45071679
Genome browser
AA seq
1093 aa
AA seq
DB search
MSGGGMEVEVRVVGGARSCFVALPLHLIHALERTSASGDLPPVLALELRGPTGGRWSLAW
SGAASRSRAIEVAQELADCISLPDGTIAQLSVARSLAKADSVRIEPYSEDDWEIIESRAK
LAEETILKQVGIVYEGMKFPLWLDGHNILKFVVMSSCPEKSVVQLVPGTEVAVAPKIRKE
PSQDVKKQSALEEQVKTKAFLRVQPADRKHIHTFKYKGVDIGVVLSYAVLIHPDTATSIS
VGNLQLVTVSPKSSKKRPAQNGKEVAQKKGMSVAKERTHEVVVYILLSDSVAKGHVMLPY
SIRHFISAGVHSWVYIKTYSANVTKDEPIATISSLRFKMHVKDAHGNSELVTQDADTSKI
TRIPPENDDFFQEAHYGESKSLQGADIESISESVSKQKFFIKHWLLGQLKEMGLHASHTE
ISSIVLPANVVLHFEVAYKKPNRGVELLYLLTFTSENSSFDNTQLKVETAWSAPIGSPEN
VELHFRKLELGEPVSFGSIMDSSATDDFKLTRSSLGWMENAMSDVTKRLSVLLSSTSLRL
FNRLKFPFPGHVLVYGPRGSGKTALTRASAKYFEDHKEILAHVIYRDCSKLALGKAKETR
QAIEDSISEALLHSPSIIIFDDLDSVVSVSSDPQVSQSSSSSDSLVRYLADIMDEYKDKT
RSTCGYGPIAFMASVQSLQSLPQDLTSSGRFDFHIELPALAVPQRKALLKHQVEEHELQC
SEEVLSEIASKCEGYDAYDLEILVDRAVHAAASRFVLPSNASPNSVKPTLVMEDFSKAMH
RFLPVAMRDLRKYAPDDKDGGWEDVGGLNEAVTIIKETLELPSKYPNIFTRAPVRLRSNI
LLYGPPGCGKTHIVRAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAAAPCLL
FFDEFDSIAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRPG
RFDRLVFCDFPRWDERLEILKVHSRTVSLAGDASLEDVASLTEGFTGADLAAILTDAGLA
AVHELLDNRENGVPESEPCISKELLMSVTRKARPSTPADDKRRYDREFGEFVSSRKSIST
KARESKGKKVTLA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggatggaggtggaggtccgcgtggtgggcggcgcgcggagctgcttc
gtcgcgctcccgctccacctcatccacgccctggagcgcacctccgcgtccggcgacctc
ccgcccgtcctcgcgctcgaactccgcggccccaccggtggccgctggtccctcgcctgg
tccggcgccgcgtcccgatcccgcgccatcgaggttgcacaagaattggcagactgcatt
tcactgcctgatggaactatagcacagctgagcgtagctcgctctctggccaaagctgac
tcagtcaggatagaaccatacagtgaggatgactgggagataatagagagccgtgctaag
ttggctgaagaaacaatcttgaagcaggtaggcattgtttatgagggtatgaaattcccc
ttgtggttggatggccataatattttgaagtttgttgtgatgtcatcttgcccagagaag
tcagttgttcaacttgtgccaggaactgaagttgctgttgcacccaaaatacgcaaagag
ccttctcaggatgtgaaaaagcaaagtgcactggaggaacaagttaaaacaaaggcattc
ctgcgtgttcaaccggctgataggaagcatatacatacattcaaatataaaggtgttgac
ataggggtggttctcagctatgctgtgctaatacaccctgatacagctacaagcatttcg
gttggcaatctccaattggtcactgtttcacctaaatcatcaaagaaaagacccgctcaa
aatggcaaagaagttgcacaaaagaagggaatgtcagtagctaaagaaagaacccacgaa
gttgtggtttatatcttactctcagactctgttgccaaagggcatgttatgctcccctac
tctattcgacacttcataagtgctggtgtacactcatgggtgtatattaagacatactca
gctaatgtcacgaaggatgagcccatagcgacaatatcttctttaaggttcaagatgcat
gtgaaagatgcccatggtaacagcgaattagtcactcaggatgcagacacttctaagata
accagaattcctccagaaaatgatgatttcttccaggaagctcattatggtgaaagcaaa
agtcttcagggtgcagatatcgagagcatttctgagtctgtgtcaaagcagaagtttttt
attaaacattggcttctcggacaacttaaggaaatgggtttacatgctagccataccgag
ataagttcaatagttttaccagccaatgttgtgctccattttgaggtggcatataaaaaa
ccaaacagaggagttgaattactatacctgctcacatttacttctgaaaactctagtttt
gacaatacacaactcaaggttgagactgcttggagtgctccaattggcagtccagaaaat
gtggaactgcatttcaggaagttggagttgggagagcctgtatcttttggttccataatg
gatagtagtgcgactgatgatttcaagctgacacgatcttctttaggctggatggagaat
gcaatgtcagatgtgacaaaaagattatctgtgctcttatcatcaactagcctgaggtta
tttaacagactaaagttcccctttcctggacatgttcttgtctatgggcctcgaggttct
gggaaaactgctttgaccagggcatctgcaaaatactttgaagatcataaagagatattg
gcacacgtaatatacagagattgttccaaacttgccctgggcaaggctaaggagacaagg
caagcaattgaggacagcatttctgaagcgctgcttcattcaccttcgatcatcatattt
gatgatctggacagtgtagtttcggtctcttcagatcctcaagtttctcaatcgtccagt
tcttctgattctctagtaaggtatttggctgacattatggatgagtacaaggataagact
cgaagtacatgtggatatggacctattgcatttatggcttcagttcaatcacttcagagt
cttcctcaagacttaacctcttctggtagatttgatttccacattgagcttcctgctctt
gcagtccctcagcgcaaagcacttctgaaacatcaagttgaggagcatgagttgcagtgt
tctgaggaagttctgtctgagatagcatcaaaatgtgaaggttatgatgcatatgacttg
gaaattttggttgatagggctgtgcacgctgctgcttctcggtttgttctgccttctaat
gcctctccgaactctgtgaaaccaactttggtgatggaagatttctcaaaggcaatgcac
cgcttccttcccgtcgcaatgcgtgatcttagaaaatatgctcctgatgataaagatggt
ggctgggaagatgttggagggctaaatgaagcagtaactattattaaagagactcttgaa
ttgccatccaaatacccaaatatatttaccagggcacctgtacggttgcgatcaaacatt
ctcctgtatggaccacctggatgtggcaaaactcacattgtgagagctgcagccgcagct
tgttctttgcgattcatttcagtcaagggcccagagctattgaataagtacatcggttca
tctgagcaatctgttcgtgacttttttgcaaaggcagctgcagcagcaccttgcctgcta
ttctttgatgaatttgactccattgcaccccagcgaggaacccatagtgctggagtttct
gatcgtgttgttaatcagttcttgacggaactagatggtgtggaaactttgactggagta
tttgtatttgcagctacgagcaagccacaactaattgatgctgcactcttgcggcctgga
aggtttgatcgtctagtcttttgtgattttcctcgatgggatgaacgtttggaaattctg
aaggtgcattccaggacggtttcgctggcaggtgatgccagtctggaagatgttgcttct
ctgaccgaaggatttactggtgctgatctcgccgctattctaacggatgctgggttggca
gcagtgcatgaacttttggacaaccgggagaacggggtcccagaaagcgaaccgtgcatc
agcaaagaacttctcatgtctgtcactaggaaggctagaccttctacacctgcagacgat
aagaggcggtatgatagggagtttggtgaatttgtgtcatccaggaagtctatttccaca
aaggcaagagagtcgaaaggcaaaaaggtcacactagcttga
DBGET
integrated database retrieval system
