Panicum hallii (Hall's panicgrass): 112896944
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Entry
112896944 CDS
T07366
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112896944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112896944
03036 Chromosome and associated proteins [BR:
phai03036
]
112896944
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112896944
Coactivators
SAGA/TFTC/STAGA complex
112896944
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112896944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
PIP49_N
Motif
Other DBs
NCBI-GeneID:
112896944
NCBI-ProteinID:
XP_025820853
LinkDB
All DBs
Position
6:complement(44267441..44275388)
Genome browser
AA seq
775 aa
AA seq
DB search
MSQATDGQLQATEQEVSVHASQQAGQPHMNTTDQFSKSELVTEGSKGEQPVQAEQQNPQL
QQFQPESRLQQAETNSFQLAEKETGSFGQQSFSVSKVDVAQPSVVQQNAKQVVGPQAPSG
AQDTRKGPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVHKDDFLRVIRNIVGDQM
LKQAAHKVFLQMQAQAQRNNQANPSQHSLFSQASAQQMPSSGSAQLHDQKVRSPGPSNQG
QKNQVPSSPQAFAPQSGTQAQTSTQHLSHDNPNPDPDAKVPNAIPNQPPRMNSAVSLQTK
NKQHQPTQFQQASQQIYGASNPGAQGYPRSITGSLRPSNPVPETQPSMHAHGMPPAKVAP
PPTHPMMQHNAVAWQMHQNKELKTNTLPPNANAKQNYESAGKARTVGAGNSSAKGKQGPP
NSSTSNASGGAKSNKKSGGQKKSSEAAGTTQSSSKKQKTSGAFQEQSIDQLNDVTAVSGV
NIREEEEQLLSAPKEESLASQEARRIAQEEEEKLFLWKGPLLKKLAEIARKCNMKNVNID
VEHCLSMCVEERLRRFISTLIRVSKQRIDTEKTGHRLVITSDVGRQILQMNQKAKEEWDK
KQAEEADKNKKQTEADGTGAAELEKEKEESRPKNVKPNKEEDDKMRTNAANVAARQAVGG
SDMLSKWQLMAEQARQKREGLDVAAASQPGKGQGPRSLSKFGKGLGENQEGSKRSHSAAF
GTGGMKRPGRTPFAGPQRTISVKDVICALEREPQMTKSRLIFRLHERLPGDSSAD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagctacagatggtcagctgcaagcaacagagcaggaagtaagtgtccatgca
agtcaacaagcagggcaaccacatatgaacacaacagatcagttctccaaatcagaacta
gtaactgaaggttcaaaaggtgaacaacctgtccaagcagagcaacagaatccacagcta
caacaatttcagccagaaagtcgactgcaacaggctgaaacaaatagcttccagttagct
gagaaagaaacagggagttttggtcagcagagtttttcagtttccaaggtcgatgtagct
cagccctcagtagttcagcagaatgcaaagcaagttgttggcccacaagcaccatctggt
gcccaggatacaaggaaagggccatctataccatttaatatgttaattcctatcctacag
gcacatcttgacagagacaaagacatgcaacttcaaactgtatgggcaaaacttaggcgt
aatgaagtccacaaagatgatttcttaagagtgatcaggaatattgttggggatcaaatg
ctcaagcaggcagcccataaagtttttctacagatgcaagcccaggcacaaagaaataac
caggcaaatccaagtcagcattctttattctctcaagcgtcagcacagcagatgccttcc
agtggttcagcacagttacatgatcagaaagttcgttcacctggaccatccaaccagggt
cagaaaaatcaggtgccatcttcacctcaggcttttgcaccacagtcaggcactcaagcg
caaactagcacacaacatctttctcatgataaccccaacccagatcctgatgcaaaggta
ccaaatgctataccgaatcaaccacctagaatgaactcagcagtttcattgcaaacaaag
aacaaacagcatcaacccactcaattccagcaggcctcacagcaaatatatggagcaagt
aatcctggtgcccagggttatcctcggtcaatcactggttctcttaggccatcaaatcca
gttccagaaacacagccttccatgcatgctcatggaatgcctcctgcgaaagttgcccct
ccccctactcatccaatgatgcagcacaatgcagttgcatggcaaatgcatcaaaacaag
gagttgaaaaccaatactctccctccaaatgctaacgcaaagcaaaactatgaatctgct
ggcaaggcccgcactgttggcgcaggaaattcttcagctaaaggaaagcagggaccccca
aactcatctacatcgaatgctagtggaggtgcgaagagtaataagaaatcgggtgggcag
aagaaatcatcagaagcagcaggcactacgcagtcttcaagcaaaaagcagaagacatct
ggagccttccaggaacaaagcattgatcaacttaatgatgtcactgctgttagtggtgtt
aatattagggaggaggaggaacagctactctctgccccaaaggaagagagccttgcctca
caagaagcaagaagaattgcacaggaagaagaagaaaagcttttcctatggaagggccca
ctcctgaagaaactagcagaaatagctcggaaatgcaatatgaagaatgttaatattgat
gttgaacattgtttatcaatgtgtgtggaggagcgattgcgaagattcataagtactctc
atacgagtctcaaaacagagaattgacactgaaaagaccgggcatcgactagttattact
tcagatgttggccgtcaaattttgcaaatgaaccagaaagctaaggaagagtgggataaa
aaacaagcagaagaagctgacaagaacaagaagcaaactgaggctgatggtactggtgct
gcagagttggaaaaggaaaaagaggaaagtcgcccaaagaatgtgaagcccaacaaggaa
gaagatgataagatgagaacgaatgcggcgaacgttgctgctcggcaagcagttggagga
agtgatatgctctcgaagtggcagctgatggctgaacaagccaggcagaagcgagaaggc
cttgatgtggctgctgcttcgcagccaggtaaaggacaaggtcccaggtcgttatccaaa
ttcggaaaaggtctcggcgaaaaccaggaaggttcaaagaggagccattctgcagcattt
gggactggaggcatgaaaagacctggcaggacgccatttgcaggaccgcaacggacgatc
tctgtgaaggatgtgatctgtgccctggagagggaacctcagatgacgaaatcacggctc
atcttccggctgcacgagcggttgcccggagattctagcgcagattag
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