Panicum hallii (Hall's panicgrass): 112897019
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Entry
112897019 CDS
T07366
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112897019
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112897019
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112897019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Prok-RING_1
VPS18_RING_C
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_Vps41
zf-C3H2C3
zinc_ribbon_16
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
112897019
NCBI-ProteinID:
XP_025820966
LinkDB
All DBs
Position
6:44763724..44766586
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AA seq
299 aa
AA seq
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MDGSSKGIGGAAADKPSPDHDQNASPNVPALAAAGDDGASAAAAAAGTEGRRPFTSLSQE
EADLALARVLQEQERAYMMLTAQYGGGEYASSDAGSYDYDEDEGSDYEEEEEEGGGDPID
EDEAVAGAEGTAAGPARGYEDDEGFARALQDAEERDVAGRLMALAGIGDWRAMEQDDDEE
VEEEDGGDDPQDAWEDVDPDEYSYEELIALGEVVGTESKGLSADTIASLPSVTYQAQDKQ
EGNMEQCVICRVEFDEGETLVALPCKHPYHSECINQWLQLNKVCPMCSVEVPTSVSKKP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacggctcctccaaggggatcggcggcgccgccgccgacaagcccagccccgaccac
gaccagaacgctagccccaacgtcccggcgctcgcagccgcaggagacgacggcgcctcg
gccgccgccgccgcggcggggacggaggggaggcggccgttcaccagcctcagccaggag
gaggcggacctcgccctcgcccgcgtcctccaggagcaggagcgcgcgtacatgatgctg
accgcgcagtacggcggcggcgagtacgcgagctcggacgccgggagctatgactacgac
gaggacgaggggagcgactacgaggaggaggaggaggagggaggtggggacccgatcgac
gaggacgaggcggtcgccggcgcggaggggaccgcggcgggccccgcgcgggggtacgag
gacgacgaggggttcgcccgcgccctgcaggacgccgaggagcgcgacgtcgccggcagg
ctcatggcgcttgccgggatcggtgattggcgagcgatggagcaggatgatgacgaggag
gttgaggaagaagatggtggggatgatccacaggatgcatgggaagatgttgacccagat
gaatactcttatgaggaattaattgcattgggtgaagttgtcggtacggaaagcaaaggc
ctatctgctgatactattgcctcgctaccttcagtaacttaccaggcacaagacaagcaa
gaaggcaacatggaacaatgtgttatttgccgtgtggagtttgatgaaggtgaaacattg
gttgcacttccttgcaaacatccataccattctgagtgcataaaccagtggctgcaatta
aacaaggtttgcccgatgtgcagcgttgaagttcccacctcagtgagtaagaagccatag
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