Panicum hallii (Hall's panicgrass): 112897119
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Entry
112897119 CDS
T07366
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112897119
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112897119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
112897119
NCBI-ProteinID:
XP_025821102
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All DBs
Position
6:complement(31591637..31595880)
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AA seq
745 aa
AA seq
DB search
MAPPPLPLFSPSPKPPPPPPWLHGPSTPTHNPSPASAAPPPPVEAAPPSKLRHHGPKPAP
ARNTGGKAAAKPLTAGVPGGRTRRAVFGIIRRVRSLELSDPPRPVPARNYDAAAVAVPFH
LPVEPQEQAREAAEKGKHRAVPWAAAGDEGLKVALRREKKAREPTRAETELAAGELDRLR
WVARGMGRWARAKKAGVTDEVLEDLRREWAKGEELAAVRIVEPLRRNMDRAREILEIKTG
GLVVWTKGDIHFVYRGSNYQQNTKQSHYSMSDVQNLKYNVPTTQLEYGNEGEVLTNANSK
ADDAFQEKYQSICGQKDEEPVKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEF
VPGFKTPFRQCPPGVRPTLADVELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWEKS
LIAKIALKVGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQRE
AQVHDEQVKEEEARLKAVDSLQMVGGLSSEESSVGTFREYQDFQADHVHGNTENSNTIIE
LEAEKHRLEKELKDQEWKLSILNKKIERSNQALAKLHSSWSPSEESADKELLTEEEKAMF
RRIGRKMDGLVLLGRRGIFGGVIEEIHQHWKHKEVVKVITKQNQARQIIYTANLLEVETG
GILIAVEKLPTSHSIILYRGKNYRRPEKSSSSNLLTKREALRRSIEVQRRGSMKYFARER
QKSILELKRRLRYVARQIKYRTPRS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaccgccgctgccactcttctccccgtccccgaagcccccgcctccgccgccg
tggctgcacggcccctccacgccaacccacaacccctcccccgcctccgcggcgcctccg
ccccccgttgaggcagctcctcccagcaagctccgccaccacggccccaaaccggcaccg
gcgagaaacactggcggcaaggcggccgccaagcccctcaccgccggcgtacccggcggc
cgcacccgccgcgccgttttcggcatcatccgccgcgtccgctccctcgagctctccgac
cctccgcgccccgtccctgcccgtaactatgacgctgccgccgtcgccgtcccgttccac
ctcccggtcgagccgcaggagcaggcccgggaagcggcggagaaggggaagcaccgggcg
gtgccgtgggcagcggcgggggacgagggcctcaaggtcgcgctgcggcgggagaagaag
gcgagggagcccacgcgcgcggagacggagctggcggccggcgagctggaccggctgcgg
tgggtggcgcgcgggatgggcaggtgggcgcgggccaagaaggccggggtcaccgatgag
gtgttggaggacctgcgccgggagtgggccaagggcgaggagctcgccgccgtgcgcatc
gtcgagccgctgcgccggaacatggaccgcgccagggagattctggagataaaaacagga
ggcttagtagtttggacaaaaggagacatacattttgtttacagaggaagcaattatcag
caaaacacaaagcaaagtcactattccatgagtgatgttcaaaatttgaaatacaatgtt
cctacaacccagcttgaatatggtaacgaaggtgaagtgctaaccaatgctaatagcaaa
gcagatgatgctttccaagaaaagtatcaaagcatttgtggtcagaaggatgaagaacct
gtcaagggaactctctatgagagagaagtcaacagattattggacagtttgggccctcga
tttgttgactggtggtggaacacaccattgcctgtggatgctgatctactcccggagttt
gttccaggatttaagactccgtttaggcagtgccctcctggtgtgagaccaacactagca
gatgtggagttgacatacttgcgcaaacttgcacgccctttgccgacacattttgccctt
ggtagaaatacaagactgcagggtttggctgctgctatactgaagctttgggaaaaaagc
cttatagcgaaaattgcgctgaaagtgggtatccaaaatacaaacaatgaacaaatggca
tggaaccttaagcatcttacaggaggcaccgtaatattgagaaacaaggattttattatt
ctatatagaggcaaggattttcttcctggtggagttgctcaaactgtaattcaacgagag
gctcaggtacatgatgaacaggtgaaggaagaagaagctcgactgaaagcagttgactct
cttcagatggtcggtggattatcatctgaagaaagttctgtaggaacattcagggagtat
caggacttccaagctgaccatgtgcatggaaatactgaaaactccaacactatcattgaa
ctagaggctgagaagcatagattggaaaaggaactgaaagaccaagaatggaagctttcc
attcttaacaagaagattgaaagatccaaccaggcactggcaaagcttcacagttcttgg
agcccttcagaggagtctgcagataaagaactcttgacagaagaggaaaaggcaatgttc
cgcaggattggccgcaaaatggatggccttgttcttctaggaaggcgtggtatctttggt
ggtgtaattgaagagattcatcagcactggaaacataaagaggttgtgaaagtaattacg
aagcagaatcaagcccgccaaatcatctacacagcgaatctgcttgaggttgagacaggt
ggtatactaatagcagtagaaaagcttccaaccagccattccataatactttaccgtgga
aaaaactatcgccgcccagaaaaatcatcatccagtaatctgctaacaaaaagagaagca
ctgcgaagatcaattgaggtccaacgacgagggtcaatgaaatactttgctcgggaaagg
caaaagtccattttggaactgaaaaggaggctgagatacgtggcaaggcaaatcaagtat
cgaaccccaagatcatga
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