Panicum hallii (Hall's panicgrass): 112897138
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Entry
112897138 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112897138
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112897138
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112897138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Sina_RING
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
DUF2039
TerY_C
UBZ_FAAP20
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112897138
NCBI-ProteinID:
XP_025821134
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All DBs
Position
6:complement(41195390..41198805)
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AA seq
407 aa
AA seq
DB search
MGAWCSKENQSGGRQPHDYNHNHNHYHNHSNGAATASKGGKNRYAKIGDDYHTLEQVTDA
LAHAGLESSNLIVGIDFTKSNEWTGRMSYNNRSLHAMGNTPNPYEQAISIIGRTLARFDE
DNLIPCFGFGDTTTHDQSVFSFYRDNQPCDGFEQALARYRELVPQLNLAGPTSFAPIIET
AIGIVDSSGGQYHVLLIIADGQVTRSVETGNGQLSPQERETIDAIVKASDYPLSIVLVGV
GDGPWDMMRQFDDNIPSRAFDNFQFVNFTQIMSRPIPASKKEAEFALSALMEIPEQFKAA
MNLQLLGRRRGFPNRPVLPPPVSDRQQYSGCSAVKQTQSTSYGAAPETPSAPQQDSDIGD
PQTCPICWNQAKDLAFGCGHQTCSDCAKDLKVCPMCQKAISVRLKLY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgtggtgctccaaggagaaccagtccggggggcggcagccgcacgactacaac
cacaaccacaatcactatcacaatcacagtaacggtgccgcgactgcgagtaaaggaggc
aagaaccgctacgccaagatcggcgacgattaccacaccctggagcaggttaccgatgcc
cttgcgcatgctggtctagaatcttcaaatctgattgttgggattgatttcacaaagagc
aacgagtggacaggcagaatgtcatacaacaaccggagcttgcacgcgatgggaaacact
ccaaacccatatgagcaggctatttctatcataggaagaacccttgcacgctttgatgag
gataacctgataccatgctttgggtttggcgatacaactactcatgatcagtcagtattt
agcttctatcgtgataaccaaccgtgtgatggctttgagcaagctcttgctcggtacagg
gaactcgttcctcagcttaatctggctggtccaacttcatttgcaccaatcattgagact
gctattggaattgttgatagtagtggtggccagtatcatgtcctgcttataatagcagat
ggacaggttacacgcagcgttgaaacaggcaatgggcagttgagcccacaggaaagggag
accatagatgccattgtgaaagctagtgactaccctctttcaattgtgcttgttggggtt
ggtgatgggccatgggacatgatgaggcaattcgatgataacataccttctcgggcattt
gacaattttcagtttgtgaacttcacacagatcatgtcaagacctatacccgcaagcaaa
aaggaggctgaatttgctctttcagcattgatggagatcccagagcagttcaaggcagca
atgaatcttcagcttcttggaagacgaaggggatttccaaaccgaccggtattgcctccg
cctgtgagcgaccgccaacaatactctggatgttcagcagtcaaacagacccaatctact
agctacggagcagcaccggaaaccccatcagcccctcaacaggacagtgacataggcgat
ccacagacctgtccaatctgctggaaccaagccaaggaccttgcttttgggtgcggccat
cagacgtgctccgactgcgcaaaggacctgaaggtgtgcccgatgtgccaaaaggccatc
tccgtgaggctgaagctctactga
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