Panicum hallii (Hall's panicgrass): 112897244
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Entry
112897244 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4-like isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112897244
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112897244
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112897244
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
zf-RING_2
Prok-RING_4
zf-C3HC4_2
Sina_RING
vWA-TerF-like
zf-RING_UBOX
PHAX_RNA-bd
Motif
Other DBs
NCBI-GeneID:
112897244
NCBI-ProteinID:
XP_025821285
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All DBs
Position
6:1845562..1848588
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AA seq
501 aa
AA seq
DB search
MPATTDERLKKFHRNFPKSLPFHRKRINFIFSIPLLVQLFFACAGLCADPCHQLRRLSVR
SNKRRASSLPPSHVRRLPPASASGSLYHRIGHRRRRMGGVFGALFGGHRRPGRRAPAVRR
HRGLVPQPSAAYDGGHRRAMLSKKYSYIPDTFTSLDQVAAALRQQGLESSNLILGIDFTR
SNEWTGKQSFGGQSLHRLGDTPNPYEQAISIIGKTLAPFDEDNLIPCFGFGDATTHDYNV
FSFHHDNSPCHGFEEVLACYRKIVPHLRLSGPTSFAPIVEAAVDIVDRSGGQYHVLVIVA
DGQVTRSVDTGDSDLSPQEKRTVDSIVMASSYPLSIILVGVGDGPWEDMQKFDDKLPARD
FDNFQFVNFTSIMARSTTAQQKESAFALAALMEVPIQYKATVELGILGRLTGNAKRVMPA
PPPLPPAQRQPSLRTGASNVNAGSAQPGEPRDDQVCPICLTNAKDLAFGCGHMCCRECGE
SLTRCPICRQPIRSKLRLYSG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgacgaccgacgaaaggctcaagaagtttcatcgcaacttcccgaaatctctt
ccttttcatcggaaaagaatcaactttatcttctccatccctctgcttgtccagttgttc
ttcgcgtgcgccggactctgcgcagatccttgccaccagctgcggcgcctttctgttcgt
tccaacaaacgaagagctagctctcttccgccctcgcatgttagacggctgccaccggcc
agcgccagcggcagcctctaccaccgtattggccaccgccgccggcgcatgggcggcgtg
ttcggcgccctgttcggcggccaccggcggccgggccggagggcgccggccgtccggcgg
caccgtggcctggtcccgcagccgtctgcggcctacgacggcgggcaccggagggccatg
ctcagcaagaagtactcgtacatacccgacaccttcacgtcgctcgaccaggtggcggcg
gcgctgcggcagcagggcctggagtcgtccaacctcatcctcggcatagacttcaccagg
agcaatgaatggacagggaaacagtcgttcggcgggcagagcctgcacaggctgggcgac
acgcccaacccctacgagcaggccatcagcatcatcggcaagacgctggcgccgttcgac
gaggacaacctcatcccctgcttcggcttcggcgacgcaaccacccatgactacaacgtg
ttcagcttccaccacgacaactccccgtgccacggcttcgaggaggtcctggcttgctac
aggaagatcgtgccgcacctcaggctatccgggccgacgtcgtttgcgccgatcgtggag
gcggccgtcgacatcgtggaccggagcggaggacagtaccacgttctcgtcatagttgca
gatggacaggtgactaggagtgttgacacgggtgacagcgatctgagcccacaggagaag
agaacagtggactccattgtcatggcaagctcctatccgttgtccatcatcctggttggg
gtcggggatggcccatgggaggacatgcaaaagttcgacgacaagctccccgcccgcgac
ttcgacaacttccagttcgtgaacttcacctcgatcatggcgaggagcacgacggcgcag
cagaaggagtcggcgttcgcgctcgccgcgctcatggaggtccccatccagtacaaggcc
accgtcgagctcggcatcctgggtcggttgacggggaacgccaagagggttatgccggcg
ccgccgccactgccgcctgcgcagaggcagccgtcgttgaggacgggagccagcaacgtt
aacgccggatcggcacagcctggagagccgagagatgatcaggtgtgcccaatctgcctg
accaatgccaaggatctggcatttggctgtggacacatgtgctgcagggaatgtggggag
agcctgaccagatgcccgatatgtcgacagccgatacggtcgaagctgaggctatattcg
ggatga
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