Panicum hallii (Hall's panicgrass): 112897284
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Entry
112897284 CDS
T07366
Name
(RefSeq) DNA polymerase I A, chloroplastic-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03030
DNA replication
phai03410
Base excision repair
phai03420
Nucleotide excision repair
phai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112897284
03410 Base excision repair
112897284
03420 Nucleotide excision repair
112897284
03440 Homologous recombination
112897284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112897284
03400 DNA repair and recombination proteins [BR:
phai03400
]
112897284
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112897284
DNA replication proteins [BR:
phai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
112897284
DNA repair and recombination proteins [BR:
phai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
112897284
NER (nucleotide excision repair)
GGR (global genome repair) factors
112897284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
112897284
NCBI-ProteinID:
XP_025821341
LinkDB
All DBs
Position
6:complement(3778929..3791800)
Genome browser
AA seq
1025 aa
AA seq
DB search
MAVAAPAPAPLLRCRGSAPPWLSSSSPPYFLRRRARRSSPPPALSVCRRQDYSHSSDMGV
RESSGFKLGFYANLNVQNIAQEWLVESRRLFYLRTINSVTNNIYKGTTPRRAGNLQNELS
EDCRGLNYPSLCNIREHVSSKSIVNRHENTELVKHSMINQPVQSVFPVSVVNNSVKQNMP
RGPNVGISLHDISNTEVIWELDNKVHDGDGKKVKKLVVKKRVSSLPTKASFSKESVEARK
EVAAIYDKVLVVDNIQSARTVVQLLTTKYKNFIHACDTEVANIDVKDETPVGHGQVTCFS
IYSANSNAQVADFGNGKTCIWVDVLDGGRDVLTEFAPFFEDPSIKKVWHNYSFDSHVIEN
HGIKVAGFHADTMHLARLWDSSRRTDGGYSLEGLTNDRRVMDVAPENLPNAGKTSMKTIF
GKKKVRKDGSEGKVIAVDPVEKLQREDRELWICYSSLDSMSTLRLYESLKRKLETKEWIF
DGCPRGTMYDFYEEYWRPFGALLVKMETEGMLVDRGYLSEIEKAAIAEREVAANKFRKWA
SKYCPDAKYMNVNSDTQIRQLLFGGIENRHKSGETWPHSKTFKVPNEESVDTEGKKTSKY
RTIKLCSIVEDLKIDMFTPSGWPSVSGDALRSLAGKIPTGHIYTIDDNEGDEEDTSGSEH
SEQEVDESSSYGTAYEAFGGGKKGKEACNAIAALCEICSIDSLISNFILPLQGDHISCAA
GRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRI
LAHLTNCKSMLDAFKAGGDFHSRTAMNMYQHIRDAVDEKKVLLEWHPQPGQEKPPVPLLK
DAFGAERRKAKMLNFSIAYGKTAVGLSRDWKVSVKEARDTLKLWYGDRKEVLAWQKRQKK
LAHEKCEVYTLLGRSRRFPNLTQFGPGQRGHIERAAINAPVQGSAADVAMCAMLEIERNT
RLKELGWRLLLQVHDEVILEGPSDSAEMAKAIVVECMSKPFYGTNILNVDLAVDAKCAKS
WYAAK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggcgccggcgccggcgccgctgctgcggtgccgcggctcggcgccgccg
tggctctcctcgtcgtcgccgccctacttcctccgccgccgcgcccgccgctcctcgccg
ccgcccgcgctgtccgtgtgcaggaggcaagactattctcatagctcagatatgggagtt
cgagaaagcagtggtttcaagcttggattctatgccaacttaaacgtgcaaaatattgca
caagaatggcttgtcgagagcaggaggctgttttatctcagaaccatcaacagtgtcaca
aataacatctataagggcaccactcctcgacgggctgggaacctacaaaatgaactctca
gaagattgcaggggtttaaactacccttccttgtgcaatataagagaacatgtatcatcc
aagtcaattgtaaatagacatgaaaatactgaactggtcaagcatagtatgataaatcag
cctgtgcaatcagtgttcccagtaagtgttgttaataatagtgtcaaacagaacatgcct
agaggcccaaatgtggggatttctttgcatgacatctctaatacggaggtaatttgggag
ctggataataaggttcatgatggtgatggcaaaaaggtcaagaaacttgtagttaagaaa
agggtttcatctttgccaactaaagcatccttctccaaggaatctgtggaagcacggaag
gaagttgctgccatctacgacaaagttttggtagttgacaatatccagtcagctaggaca
gttgttcaactgcttactacaaagtacaagaactttattcatgcatgcgacacggaggta
gcaaatattgacgtcaaagatgagacaccagttggtcatggacaagtaacatgctttagc
atctattcagcaaattctaatgcacaggtcgctgattttggaaatggaaaaacttgcatt
tgggttgatgttctggatggtgggagggatgtcctgacggagtttgctcctttctttgaa
gatccatccatcaagaaggtttggcataactatagctttgatagccatgtcattgagaac
catggaattaaagttgctgggtttcatgctgatacaatgcatcttgcacgcctttgggat
tcatcaaggagaactgatggtggatattctcttgaaggacttacaaatgaccgtagagtc
atggatgttgctccagagaatttacctaatgctggaaagacatcaatgaaaaccatcttt
ggcaagaaaaaagttagaaaggatggatctgaagggaaagtcatagctgttgacccagtt
gaaaagttacaaagggaagacagggagttgtggatttgctattcttcactagattcaatg
agcaccttgcggctttatgagagcttaaaaagaaagcttgaaacaaaggaatggatcttt
gatggttgccccaggggcacaatgtacgatttctatgaagagtattggcgtcccttcggt
gcccttcttgtgaagatggaaacagagggaatgcttgttgatcgtggttacctttcagag
atagaaaaggctgctattgctgaacgagaagtagctgcaaataagtttcggaaatgggca
tctaaatactgtcctgatgccaagtacatgaatgtgaatagcgatactcaaattcgccaa
cttctctttggtggcattgaaaatagacataaatctggtgaaacctggccacacagtaaa
acttttaaagtgccaaatgaagaaagtgtagatacagagggaaagaagacttcaaagtat
cgtacaatcaaactttgcagtatcgttgaagatctgaaaattgatatgttcacccctagt
ggctggccatcagtcagcggtgatgcattgagaagcttggctggtaaaatacccacggga
catatttacacaatagatgataatgaaggggatgaagaagatactagtggttctgaacat
tctgagcaggaagtagatgaaagttcctcatatggaacagcatatgaagcgtttggtgga
ggaaagaagggaaaagaagcatgcaatgcaattgcagctttatgcgaaatatgttctatc
gattcattgatatccaatttcattcttcccttgcagggagatcatatatcttgtgccgcg
gggcggattcactgttcattaaatatcaatactgagacaggacgcttgtcagcacgaacg
ccaaatctacagaatcaacctgcccttgaaaaggataggtataagattcgccaagccttc
gttgcagctccaggaaattctcttattgttgctgattatggtcagctggagctgaggatc
ttagcccaccttactaactgtaaaagcatgctggatgctttcaaggctggtggtgatttc
cattctaggaccgccatgaatatgtaccagcatatccgtgatgctgttgatgaaaagaaa
gttcttcttgagtggcaccctcaacctggtcaagagaaacctccagtgcctctattgaag
gatgcttttggtgctgagaggaggaaagctaaaatgcttaatttctcaattgcgtatgga
aagacagctgttgggctatctcgagattggaaggtttctgttaaggaggcgagggataca
ctcaagctatggtatggagatagaaaagaagtgttagcttggcaaaagaggcaaaagaag
cttgcacacgagaaatgcgaagtttacactttgcttgggcgatcgcgccgttttcctaac
ttgactcaatttggtcctggtcaacgaggtcatattgagcgtgctgctataaatgcacca
gtgcagggaagtgcagcagatgttgctatgtgtgccatgcttgagattgaaaggaatacc
cgtcttaaggagcttggttggaggctcctattgcaggtgcatgacgaagtgatactggaa
gggccttcggattctgctgagatggccaaggccatagtggtggagtgtatgtccaaacct
ttctatggaaccaacatcctgaatgtcgacctggctgttgacgccaagtgcgcaaagagc
tggtatgctgccaaatag
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