Panicum hallii (Hall's panicgrass): 112897822
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Entry
112897822 CDS
T07366
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112897822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112897822
04147 Exosome [BR:
phai04147
]
112897822
04090 CD molecules [BR:
phai04090
]
112897822
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112897822
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112897822
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112897822
CD molecules [BR:
phai04090
]
Proteins
112897822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_29
nSTAND1
RsgA_GTPase
AAA_30
AAA_25
DUF87
DUF6264
DUF815
Rad17
Motif
Other DBs
NCBI-GeneID:
112897822
NCBI-ProteinID:
XP_025821997
LinkDB
All DBs
Position
6:45588281..45594924
Genome browser
AA seq
1365 aa
AA seq
DB search
MSSAAADPEEIRARVVVLGAHHADAADEWARPELEAFHLPSPSHQPSSDGFLAQDGEAEQ
STPPAAAGTPAPPPPPPPPPLETAEQPASNARPSSNNDAKKPTPPAALRDLFRFADGLDC
VLMLVGTLGALVHGCSLPVFLRFFADLVDSFGSHADDPDTMVRLVVKYAFYFLVVGAAIW
ASSWAEISCWMWTGERQSTRMRIRYLDAALRQDVSFFDTDVRTSDVIYAINADAVIVQDA
ISEKLGNLIHYIATFVAGFVVGFTAAWQLALVTLAVVPLIAVIGGLSAAALAKLSSRSQD
ALSNASNIAEQALAQIRIVQAFVGEERAMRAYSAALAVAQKIGYRSGFAKGIGLGGTYFT
VFCCYGLLLWYGGHLVRAHHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKARVAAAKI
FRIIDHKPGISRDGGGVELESVTGRVEMRSVDFAYPSRPDVPILRGFSLSVPAGKTIALV
GSSGSGKSTVVSLIERFYDPSAGQILLDGHDLKSLKLRWLRQQMGLVAQEPTLFATSIKE
NLLLGRESESATQAEMEEAARVANAHSFIIKLPDGYDTQVGDRGLQLSGGQKQRIAIARA
MLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGG
AVSEMGTHDELMAKGEHGTYAKLIRMQEQAHEAALVNARRSSARPSSARNSVSSPIMTRN
SSYGRSPYSRRLSDFSTADFTLSIHDHHHHQNQPVAFRAGASSFLRLARMNSPEWGYALL
GSLGSMVCGSFSAIFAYVLSAVLSVYYAPDPRYMERQIAKYCYLLIGMSSAALVFNTVQH
MFWDAVGENLTKRVREKMFAAVLRNEIAWFDADENASARVAARLALDAQNVRSAIGDRIS
VIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVGATVLQKMFMKGFSGDLEAAHARAT
QIAGEAVANLRTVAAFNAERKITGLFEANLRGPLRRCMWKGQIAGSGYGVAQFLLYASYA
LGLWYAAWLVKHGVSDFSRTIRVFMVLMVSANGAAETLTLAPDFVKGGRAMRSVFETIDR
KTEVEPDDVDAAPVPERPRGEVELKHVDFAYPSRPDVQVFRDLSLRARAGKTLALVGPSG
CGKSSVLALVQRFYEPSSGRVLLDGKDVRKYNLRALRRVIAVVPQEPFLFAASIHDNIAY
GREGATEAEVVEAAAQANAHKFISALPEGYRTQVGERGVQLSGGQRQRIAVARALVKQAP
ILLLDEATSALDAESERCVQEALERAGAGRTTTTIVVAHRLATVRNAHTIAVIDDGKVVE
QGSHSHLLKHHPDGCYARMLQLQRLTGAGAGPGPSSSLASPSIGT
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgccgctgccgacccggaggagatcagggcgcgcgtcgtcgtcctcggcgcc
caccatgccgacgccgccgacgagtgggcgcggccggagctcgaggccttccacctgccc
tccccatcccaccagccctcctccgacggcttcctagcacaagacggagaagcagagcaa
tccacaccccctgctgctgctggtacccctgctccacctcctcctccgcctccgcctcct
ctggagaccgccgagcagcctgcttccaatgccaggccatccagtaataacgacgccaag
aagcccaccccgccggccgccctgcgcgacctcttccgcttcgccgacggcctcgactgc
gtgctcatgctcgtcggcaccctcggcgccctcgtccacggctgctcgctccccgtcttc
ctccgcttcttcgcagacctcgtcgactccttcggctcccacgccgacgacccggacacc
atggtccgcctcgtcgtcaagtacgccttctacttcctcgtcgtcggggcagcaatctgg
gcatcctcatgggcagagatctcttgctggatgtggaccggcgagcgccagtccacccgg
atgcggatccgctacctcgacgccgccctccgccaggacgtctccttcttcgacaccgac
gtccgcacctccgacgtcatctacgccatcaacgccgacgccgtcatcgtgcaggacgcc
atcagcgagaagctcggcaacctcatccactacattgcaaccttcgtcgcaggcttcgtc
gtcggattcactgccgcctggcagctcgcgctcgtcacgctcgccgtcgtgccgctcatc
gccgtcatcgggggcctcagcgccgctgcgctcgccaagctctcctccaggagccaggac
gcgctctccaacgccagcaacatcgccgagcaggcgctggcgcagatacggatcgtgcag
gcattcgtcggcgaggaacgcgcaatgcgggcctactcggcggcgctcgccgtggcgcag
aagatcggctaccgcagcggcttcgccaaggggatcggcctcggcggcacctacttcacc
gtcttctgctgctacggcctgctgctctggtacggcggccacctggtgcgcgcccaccac
accaacgggggcctcgccatcgccaccatgttctccgtcatgatcggaggcctggccctc
gggcagtcggcgccgagcatggccgccttcgccaaggcgcgcgtggcggccgccaagatc
ttccgcatcattgaccacaagccggggatctcacgggacggcggcggcgtggagctggag
tcggtgacggggcgggtggagatgcggagcgtggacttcgcgtacccgtcgcggccggac
gtgcccatcctgcgcggcttctcgctgagcgtgccggccgggaagaccatcgcgctggtg
gggagctccggctccgggaagagcacggtggtgtcgctcatcgagaggttctacgacccc
agcgcagggcagatcttgctggacgggcatgatctgaagagcctgaagctccggtggctc
cggcagcagatgggcctggtggcgcaggagccgacgctgttcgcgacgagcatcaaggag
aacctgctgctggggcgggagagcgagagcgcgacgcaggcggagatggaggaggcggcc
agggtggccaacgcccactcattcatcatcaagctccccgacggatacgacacgcaggtc
ggcgatcgcgggctccagctctccggcggtcagaagcagcgcatcgccatcgcccgcgcc
atgctcaagaacccggccatcctgctgctggacgaggccaccagcgcgctggactcggag
tcggagaagctggtgcaggaggcgctggaccgcttcatgatcgggcgcaccaccctggtg
atcgcccaccgtctctccaccatccgcaaggccgacctggtggccgtgctccagggcggc
gccgtctccgagatgggcacccacgacgagctcatggccaagggggagcacggcacctac
gccaagctcatccgcatgcaggagcaggcgcacgaggccgcgctcgtcaacgcccgccgg
agcagcgccaggccctccagcgcccgcaactccgtcagctcccccatcatgacgcgcaac
tcctcctacggccgctccccctactcgcgccgcctctccgacttctccaccgccgacttc
accctctccatccacgaccaccaccaccaccaaaatcaacccgtggccttccgcgccggc
gccagctccttcctccgcctcgccaggatgaactcgcccgagtggggctacgcgctgctc
ggctccctgggctccatggtctgcggctccttcagcgccatcttcgcctacgtcctcagc
gccgtgctcagcgtctactacgcgccggacccgcgctacatggagcgccagatcgccaag
tactgctacctcctcatcggcatgtcgtcggcggcgctggtgttcaacacggtgcagcac
atgttctgggacgccgtcggcgagaacctcaccaagcgcgtgcgcgagaagatgttcgca
gccgtgctccgcaacgagatcgcctggttcgacgccgacgagaatgccagcgcgcgcgtc
gccgccaggctcgcgctcgacgcccagaacgtgcgctccgccatcggggaccgcatctcc
gtcatcgtccagaactcggcgctgatgctcgtggcctgcaccgcgggcttcgtcctccag
tggcgcctcgcgctggtgctcctggccgtgttcccgctggtagtcggcgccaccgtgctg
cagaagatgttcatgaagggtttctcgggggacctggaggccgcgcacgccagggccacg
cagatcgccggcgaggccgtcgccaacctgcgcaccgtggcggccttcaacgcggagcgc
aagatcacggggctgttcgaggccaacctgcgcggcccgctgcggcggtgcatgtggaag
gggcagatcgccggcagcggctacggcgtggcgcagttcctgctgtacgcgtcgtacgcg
ctggggctctggtacgcggcctggctggtgaagcacggcgtctccgacttctcgcgcacc
atccgcgtcttcatggtgctcatggtgtccgccaacggcgccgccgagacgctgacgctg
gcccccgacttcgtcaagggcggccgcgccatgcgctccgtgttcgagaccatcgaccgc
aagacggaggtggagccggacgacgtggacgcggcgcccgtgccggagcggccgcgcggc
gaggtggagctcaagcacgtggacttcgcctacccgtcgcggccggacgtgcaggtgttc
cgggacctcagcctccgggcgcgcgccggcaagacgctggcgctggtggggccgagcggg
tgcggcaagagctccgtgctggcgctggtgcagcgcttctacgagcccagctccgggcgc
gtgctcctcgacggcaaggacgtgcgcaagtacaacctgcgggcgctgcggcgcgtcatc
gcggtggtgccgcaggagcccttcctgttcgcggcgagcatccacgacaacatcgcctac
gggcgcgagggcgcgacggaggcggaggtggtggaggcggcggcgcaggccaacgcccac
aagttcatctcggcgctgccggaagggtaccggacgcaggtcggggagcgcggggtgcag
ctgtccggcgggcagcggcagcggatcgccgtggcgcgcgcgctggtgaagcaggcgccc
atcctgctgctggacgaggccaccagcgcgctggacgcggagtcggagcgatgcgtgcag
gaggcgctggagcgcgcgggggccgggcgcaccaccaccaccatcgtggtggcgcaccgc
ctcgccacggtgcgcaacgcccacaccatcgccgtgatcgacgacggcaaggtggtggag
cagggatcgcactcgcacctgctcaagcaccacccggacggctgctacgcgcggatgctg
cagctgcagaggctcactggtgctggtgctggacctggaccctcgtcgtcgttggcgtcg
ccgtccatcgggacctag
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