KEGG   Panicum hallii (Hall's panicgrass): 112897850
Entry
112897850         CDS       T07366                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112897850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112897850
   03041 Spliceosome [BR:phai03041]
    112897850
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112897850
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112897850
Spliceosome [BR:phai03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112897850
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 112897850
NCBI-ProteinID: XP_025822029
LinkDB
Position
6:11201224..11204345
AA seq 351 aa
MAGKMKEFDGASPAKIFIGGLSKDTSMGTFKEHFGKYGDITDAVIMKDRYTQKPRGFGFI
TFADPAVVDRVIEDDHVINGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKE
FFSKFGKVVEHEIIRDHATNRPRGFGFIVFDAEKTVDELLAKKGNMIDLNGSQVEIKKAE
PKKPSNPPPRSIDREPRGRPYADSYDGFGSSYNYGGSFGPYRSPGSFGARPGGYSSAYGP
VDYGSGYGAYGGALGGYRGESSLYSSRFGSTYGGSFGGGYGGGSYAGGLAGAYGRDAGVY
GGSSYGPSYDSSGASAGSGAGYGTGGLYGARTGYGSTGGSSAAGRYHPYGR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggccggcaagatgaaggagttcgacggcgccagcccagccaagatcttcatcggcggg
ctctccaaggacacaagcatgggtacattcaaagagcattttgggaagtacggggatata
actgatgccgtcataatgaaggaccgctacactcaaaagcccagaggctttggatttatt
acctttgcagatcctgctgttgttgacagagtgattgaagatgatcatgttatcaatgga
aagcaggttgaaattaaaagaactatccccaagggtgctgcgcccttgaaagatttcaag
acaaagaagatttttgttggtggattaccctctgctctaaaagaagatgagttcaaggag
tttttttcaaagtttggaaaggtggtggagcatgaaatcattcgtgaccatgcaactaac
cggccacgtggatttggttttatagtctttgatgctgaaaaaactgtagatgagttatta
gctaagaaaggcaatatgattgatctaaatggttctcaggtggagatcaagaaggcagaa
ccaaagaaaccctctaacccaccacctcgttcaattgatagggaacctaggggccgtcca
tatgcggacagttatgatggatttggcagctcctataactatggtggtagttttggcccc
tatagatcacctggaagttttggtgctaggcctggtggctacagtagtgcttatggtcct
gttgactatggtagtggctatggtgcatatggtggagcattaggaggatacaggggagaa
tcctcactctattctagtcgttttggtagcacatatggaggaagctttggtggcgggtat
ggtggtggcagttatgctggtggattagctggtgcctatggacgtgatgctggggtttat
ggtggttctagctatgggcctagttatgattcttctggtgctagtgctggttctggtgct
gggtatggcacgggtggactctacggtgctaggacaggctatggtagcactggtggcagt
agtgctgctggtcgttaccatccatatggaagatag

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