Panicum hallii (Hall's panicgrass): 112898301
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Entry
112898301 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF217
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112898301
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112898301
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112898301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112898301
NCBI-ProteinID:
XP_025822437
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All DBs
Position
6:39234308..39235515
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AA seq
329 aa
AA seq
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MAAGSSSDGLIAVVDDFYFSVLAHGRNDDDEDEAGGDELFPISDEKYAAELQLQEVIMSS
AVAATVGSSSASPRRGSTAAAASAHGTGECSYASSSSSRPSPPLAAAAAAPAAATSLVFC
KICMDAVPPADAYRASRGCAHAFCGGCLARYVGAKVQERIADVRCPEERCGGALDPELCQ
GILPREVFERWGAALCESMLLGTRKTYCPYKDCSTMMLVDNDGGGDVRDVAEAECPSCRR
LFCARCAVAPWHAGVTCAEYKGLRKGDMGKEDMLLLEMAKGRKWKRCPKCEFFVEKRDGC
LHITCRCGFEFCYGCGGQWGITHSSCSTA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagccggatcttccagcgacggcctcatcgccgtcgtcgacgacttctacttctcc
gtcctcgcccacggccgaaacgacgacgacgaagacgaggccggcggcgacgagctcttc
ccgatatccgacgagaagtacgccgcggagctccagctgcaggaagtgatcatgtcctct
gccgtcgcggccacggtgggttcgtcctcggcctcgccacgtcgcggcagcacggccgct
gcggcgtcggctcacggcacaggtgagtgctcctacgcctcctcgtcgtcgtcccggccg
tcgccgcccctcgccgccgccgccgccgcccccgccgccgcgacgtcgctcgtcttctgc
aagatctgcatggacgcggtgccgcccgccgacgcgtaccgcgccagccgcggctgcgcg
cacgccttctgcggcggctgcctcgcgcgttacgtcggcgccaaggtccaggagcggatc
gccgacgtccggtgccccgaggagcggtgcggcggcgcgctggacccggagctctgccag
ggcatcctgccccgggaggtcttcgagcggtggggcgccgcgctgtgcgagtccatgctg
ctggggaccaggaagacctactgcccctacaaggactgctccacgatgatgctggtggac
aacgacggcggcggcgacgtccgcgacgtcgcggaggcggagtgcccgagctgccggagg
ctcttctgcgcgcggtgcgccgtggcgccgtggcacgccggcgtgacctgcgccgagtac
aaggggctccggaagggggacatgggcaaggaggacatgctgctgctcgagatggccaag
gggaggaagtggaagcggtgccccaagtgcgagttcttcgtggagaaacgcgatggttgc
ctgcacattacttgcagatgtggcttcgagttttgctatggatgtggcggccagtggggg
ataactcattctagttgcagcacagcctga
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