Panicum hallii (Hall's panicgrass): 112898612
Help
Entry
112898612 CDS
T07366
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112898612
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112898612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_LRRK2
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_IFT122_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
112898612
NCBI-ProteinID:
XP_025822750
LinkDB
All DBs
Position
6:14753052..14758609
Genome browser
AA seq
427 aa
AA seq
DB search
MAPPPPKQLVLAASSADAGVAAWDLRTGAEEIRHRPCASRPRALASVADRFLAAAQAPPA
GGNSGTVHFYHWDKPQVAVKSFPAEPIRALLADQEGSYLIGGGSNGNLFLWEVASGELLH
TWHAHYRAVRCLALYDYLLVSGSEDGSVKVWDLITVLDEQSRLEAQTPYLYSFNQHALPV
TDIACFLGAIAVSSSEDRTCKIWSLSEGRMLRSIPFPSSIDSVALDPRSHVFYAGGRDGK
IYVTAMGVDISSHGGDESSILGALDDQSKAVTSLASSTDGLVLVSGSEDGNVRVWDTRSQ
QVTRKFKHSQGPVTNVLIVAPKRVNLPPLHPLRKVCSANGEVEPRAVILPRPENDVPIHG
NRTSIFMEHYLDELQKYGGSSMLFDSGLNTQNCAANQQGTEWRGRYLELQDLFVHEVLDQ
MPSSRNP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgccgccgaaacagcttgtgttggccgcgtcctccgcggacgccggtgtg
gccgcctgggacctccgcaccggcgcggaggaaatccgccaccgcccctgcgcctcccgc
cctcgcgcgctcgcctcggtcgccgaccgcttcctcgccgctgcacaggcccctcccgct
ggcggaaactccggcaccgtccacttctaccactgggacaagccgcaggtggccgtcaag
agcttccccgctgagccgatacgcgctcttcttgcggaccaggaggggagctacctcatt
ggcggtggcagcaatggcaacttattcctttgggaggtggctagtggagagcttctccac
acatggcatgcgcactatcgtgctgttaggtgcctcgcgctttatgactatctgcttgtc
tcaggatcagaagatggaagcgtcaaagtttgggatctgatcacggtgcttgatgagcag
tcaaggttggaggcccagacaccatacctctacagtttcaatcagcatgcactgcctgta
actgatattgcttgtttccttggagcaattgctgtatcttcttcagaagatcgaacctgc
aaaatctggagtttatctgagggtaggatgctaagaagcattccattccctagtagcatt
gattctgtagcactagacccaagaagtcatgttttctatgctggtggtagagatggaaag
atatatgttactgctatgggtgttgatatcagttctcatggtggtgatgagtcatctatt
cttggcgctttggatgaccaaagcaaggcagtaacaagcttggcatcaagcacagatgga
cttgtactagtttctggatctgaggatggtaatgttcgggtgtgggatactagaagtcag
caagtaacccgaaaattcaaacactcccaaggtccagtaaccaatgttctgatagtagcg
ccaaaacgagtaaacctgcccccactgcacccattgcgtaaagtttgctcagcaaatggt
gaagttgaaccacgtgctgtaattctgcctcggcctgaaaatgatgttcctattcatgga
aatcgaacctcaatttttatggagcactacttggatgaacttcagaagtatggtggttct
tccatgctatttgattctggtctgaacactcagaattgcgcagcgaaccaacaagggaca
gaatggagaggtagatacttggagttgcaggatctctttgtgcatgaggtcctcgatcag
atgccgtcctctaggaacccatga
DBGET
integrated database retrieval system
