Panicum hallii (Hall's panicgrass): 112899157
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Entry
112899157 CDS
T07366
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112899157
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phai04812
]
112899157
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112899157
Cytoskeleton proteins [BR:
phai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112899157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
Cnd1
HEAT_EZ
XMAP215_CLASP_TOG
INTS1_R4
Tti2
TOR1L1_N
Adaptin_N
RTP1_C1
HEAT_DAAF5
Sec7-like_HUS
Dopey_N
MMS19_C
Motif
Other DBs
NCBI-GeneID:
112899157
NCBI-ProteinID:
XP_025823294
LinkDB
All DBs
Position
1:58954469..58963575
Genome browser
AA seq
1401 aa
AA seq
DB search
MLQPCNGYELSSTDETSGTYQLLPPSRKDLPLQHLHILSLPSRPSPANNPGQSHFQTAKP
AHIKPPLSKPRTSLRVLLPRAESLITSLSSPPPPHALTHRTLAPAAAMASSAAVARLREL
ATAPGAGLDGPGAAALAECCAELLRAGGGDAEAAREALEALCAAGGGDAMRRHADGLAPL
VVARLGDGDAAVREAARRFLVLLMEMKEMNARTESTQPNTCMSDSDDQHVHCTTIKMESY
SQVRKSSKEKITTRDISLLAGEGDITKKLVEPLKVFSEKDLLREIEKVVSTLQPDNEWSI
RITAMQRVEGLVLGGAADYSAFPMLLKQLVTPLITQLLDRRSSVVKQACHLLNFLSKELL
RDFEPYAELLIPVLLKNVVITILVIAESADNCIKEMLRNCKVARILPRIIEFAKNDRSAV
LRARCCEYAILMLEYWVDTPEIQRSAYLYEDLIKCCIEDATSEVRSSARACYRMFSRIWP
ERSRMLYSSFEPSRQKMINDEDAETHQRHLPPVESVKLSQPQPSSCTPAVTDKVVKVDSG
TSFSFGDLQPSQILCLEYDDMTSKCQDQGSKNDTSAIGSSFEDKITLGKEEFTNRDTGKC
DSDNSAGFNSSSCDLPSDTPFATGAPSEMPLTDAAVVTIVQDKAECVSNAEQITSHQVQG
PEDPSELTSMPPAVSLRGSGNLLKQNPIEVSSDAGSGGKLGPQQERKHCFGTPKKSAVSK
EPRNSYTPNFRRPLLSKQMTNWFYASTKSDLDEKKLILGDMISNMDVPSSLTEALSLGLN
PRSDWMMKVYAFDFLRQCLLERGPKGIQEVAQSFEKVMRLVCRYLDDPHHKVAQAALSSL
TEIMPAFKKPFEHYLDKTLPHIFSRLNDPKESIKKQCLAILKLASELYFIDSLLPALLRS
LDEQKSPKSKLAVLEFANASFAKCTINSESYSSSSFLKPWFGKLALLFKDKSKKLKEVAV
VGFSSIYSHYDPASMLSFLVSLSMEEQKRLRQAMKQLIPTIEGDLEEFLQQRRHKQKASS
FDIFTAKSPLHPASQSAKSPMHPAYRSAKSPLHPTYQYAKSPLHPTYQSAKSPMHPAHPS
NSVKTDDCFSSALQCLPNISLEVQERRTERVEFESSNEYYGHKAEMMDKKSSTMRPRNSL
QRRIDFSMISDNTIQNASGDSQNMKVFDKPNASELSMNFRNEATGYDCQDHKEAVRQLEE
VSETNGHRVPKNLHQMSSSLLEMLDDPDVPTRELALSLLVEILEKHRKAMESSVEILIVK
LLHATKDAALKVVNQAHICLTTVVTQFDPLRCLGAISSQLACQDEKILIISINSLSKLVN
RLSQETLMAHLSTFLPALLDAFENHSPYVRKAVMVCVVDTYLKLGPSLLPYLEGLDSAQL
QLVTTYASRLSQARFIAAADG
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaccgtgcaacggctatgagttgagttcaaccgatgaaaccagtggaacttat
caactgctccctccgtcccgcaaagacttgccactgcagcacctccacattttgagcttg
ccaagtaggccgtcaccggctaataatcctggtcaaagccatttccaaaccgctaaaccc
gcgcatataaaaccaccgctctccaaaccccgcacctcgctccgtgtcctcctccctcgc
gccgaatcgctgatcacttctctctcctctccaccaccacctcacgccctcacccatcga
accctcgcgccggcggccgcgatggcgtcctccgccgcggtggcgcggctgcgggagctg
gcgacggcgcccggggcggggctcgacggccccggtgcggccgcgctcgccgagtgctgc
gcggaactcctgcgcgccggcggcggcgacgccgaggccgcgcgcgaggcgctcgaggcg
ctttgcgccgcaggcggaggggacgcgatgcggcgccacgccgacgggctcgcgccgctg
gtcgtggcgcggcttggggacggcgacgcggccgtgcgggaggccgctaggaggttcctc
gtgctgctcatggagatgaaggagatgaatgcaagaacggaaagtacacagccaaatacc
tgcatgtcagactcagatgaccaacacgttcattgtacgacaatcaagatggaatcttac
agtcaagtgagaaaaagctccaaagaaaagatcaccacaagagatatctcacttcttgca
ggagaaggagacattacaaagaaattagttgaacctttaaaggttttctctgagaaggac
ctactaagggaaatagaaaaggtagtatctactttgcagccagataatgagtggtcgatc
cggataactgcaatgcaaagagtggaaggcttggtgctcggaggtgctgcagactattca
gccttccccatgctactaaaacagctcgtgacccctctaataactcagcttctggatagg
agatcaagcgtcgtaaaacaggcatgccatttactaaacttcctatcgaaagagctacta
cgtgacttcgaaccatacgcagagctgctcattccggtccttcttaagaacgtcgtaatc
accattcttgtaattgctgagtctgctgataactgtataaaagagatgctaaggaactgc
aaggtggctcgtatattaccaaggattattgaatttgcaaagaatgatagaagtgccgtt
cttcgtgccaggtgttgcgaatatgcaatactaatgctagagtactgggttgatactcca
gaaatacagagatcagcttatctgtacgaagaccttatcaaatgttgtatagaagatgca
actagcgaggttcggtcaagcgctagggcatgctacaggatgttctcaaggatatggcct
gagcgttcacgcatgttgtactcatcctttgaaccatctagacagaaaatgataaatgat
gaagatgctgagacacatcaaaggcatctgcctccagtagaaagtgttaaactaagtcaa
cctcaacctagttcttgcactccagctgtaacggacaaagttgttaaggttgattctggg
acatcattttcttttggagacttgcaaccatcacagatactatgcctcgagtatgatgat
atgacctcgaaatgccaagatcaaggcagtaagaatgacacttcggctattggaagttct
tttgaagataagatcacactgggaaaggaagaatttacaaacagagatactggtaaatgt
gattcagacaacagtgcaggtttcaattcatcgtcttgtgacctaccatctgatactccc
tttgcaacaggggcaccttcagagatgccattaactgatgcagctgttgtaacaattgtt
caagataaggctgaatgcgtttcaaatgctgaacagataacttctcatcaagttcaagga
ccagaggatccttctgagttgacgagcatgccacctgccgttagcttgagaggatcaggg
aacttgctaaagcaaaatcctattgaagtaagctctgatgccggatcaggcggaaaacta
ggccctcagcaggagaggaagcattgttttggcactcctaagaagagtgctgtttctaag
gagccacgtaatagttacactcctaacttccggcgaccactgttgagtaagcagatgaca
aattggttttacgccagtaccaaaagtgatttagatgagaagaaactcattttaggtgac
atgatcagcaacatggatgtgccctcatctctcacagaggcactttctttaggtcttaac
ccaaggtcagattggatgatgaaggtatatgcatttgatttcttaagacagtgtttgtta
gaacgtggaccaaaaggcattcaggaggttgcacaaagttttgagaaggttatgaggctt
gtttgtcgatatctggatgatccccatcacaaagtggcacaggctgctctctcatcactc
actgagatcatgccggcttttaagaaaccttttgaacattatctcgacaagacactgccc
catattttctctcggttaaatgatccaaaggaatcaattaagaagcagtgcttggcaatt
ttgaaacttgcaagtgaactttatttcattgattctctcttacccgccttacttcgttca
ctagatgagcagaaatctccaaagtcaaagctggcagttctcgagtttgcaaatgcctct
tttgcaaaatgcacaatcaattctgaaagctattctagcagcagtttccttaagccatgg
tttggaaaacttgcccttttgtttaaggataaaagcaaaaaactgaaggaggttgcggtg
gttggtttctcatcaatttattcccattatgatcctgcatcaatgttaagctttttggtc
agcttgtcaatggaagaacagaagcggctaagacaggcaatgaagcaactaataccaaca
atagaaggtgatttagaagagttcttgcagcaaaggagacataagcaaaaggcttcatct
tttgatatttttactgcaaaatcaccgcttcatcctgcatctcaatctgctaaatcaccg
atgcatcctgcatatcgatctgctaaatcaccgcttcatcccacatatcaatatgctaaa
tcaccgctacatcccacataccaatctgctaaatcaccgatgcatccagcacatccatct
aattctgttaagactgatgattgtttcagttctgcactccagtgtctcccaaatatatct
ttggaagtgcaggagcgccgtactgagagggttgagtttgaatccagtaacgaatattac
ggtcacaaagctgaaatgatggataagaagtctagtaccatgaggccaaggaacagtctc
cagagaagaattgacttcagtatgatatcagataacacaatccagaatgcaagcggggac
agtcagaatatgaaggtatttgataaaccaaatgcaagtgaactgagcatgaatttcaga
aatgaagccacggggtatgactgccaggatcataaggaggcagtgaggcaattggaagaa
gtttcggagactaacggacatcgtgttcccaagaatttacatcagatgtcttcttcactt
cttgagatgcttgatgatccagatgtgcccaccagagagctagccctttctctattggtt
gaaattcttgaaaagcatagaaaggcaatggagagctctgtggaaattctcatagttaaa
ttactgcatgcaaccaaagacgctgccttgaaggttgtaaatcaggcccatatctgcttg
acaactgtggtcacacaatttgacccactgagatgccttggggccatatcttctcaatta
gcctgccaggatgagaaaattcttattatcagcataaatagtttgagcaagcttgtgaat
cgattgtcacaggaaaccctcatggctcatttgtcaacatttcttcctgcacttctggat
gcttttgaaaaccacagcccatatgtccgcaaggctgtgatggtgtgcgtggtggacaca
tacctgaagctggggccgtcgctgctgccgtatctggagggcctggacagcgcgcagctg
cagctcgtaaccacctacgccagccggctgtcccaggcaagattcattgcagcagcggac
ggctga
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