Panicum hallii (Hall's panicgrass): 112899163
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Entry
112899163 CDS
T07366
Name
(RefSeq) cysteine protease ATG4B-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112899163
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112899163
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112899163
03029 Mitochondrial biogenesis [BR:
phai03029
]
112899163
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
112899163
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112899163
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112899163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
112899163
NCBI-ProteinID:
XP_025823301
LinkDB
All DBs
Position
7:complement(47361009..47365289)
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AA seq
484 aa
AA seq
DB search
MTSLPERGEAPPSNSLCEEDTAAAVASSSSSSEHKEDSSSKQSKASILSGVFTPPFTIFE
GQQDSLPACEKKSPKPSSGSYAWSRILRRFVGSGSMWRLLGCTKVLTSSDVWFLGKCYKV
SPEESSSNSDSESGHAAFLEDFSSRIWITYRKGFDAISDSKLTSDVNWGCMVRSSQMLVA
QALIFHHLGRSWRKPPEKPYNPQYIGVLHLFGDSEACAFSIHNLLQAGKSYGLAAGSWVG
PYAMCRAWQTLIRTNREQADAVGGKENFPMALYVVSGDEDGERGGAPVVCIDVAAQLCSD
FNKGQSTWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSLGILGGRPGTSTYIAGVQD
ERALYLDPHEVQMAVNIAPDNLEADTSSYHCSVVRDLALDQIDPSLAIGFYCRDKDDFDD
FCSRASELVEKANGAPLFTVVQSIEPSKQMYKQDGGLGCSGSSMANDDDLDDSGEAGEEE
WQIL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttgcctgagaggggagaagcaccgccatccaattctttgtgcgaggaagac
actgcagctgcagttgcctcttcttcttctagctctgagcacaaggaagatagcagctcc
aagcagtcaaaggcctccatcctatctggcgtcttcactcccccatttaccatctttgag
ggccagcaggactcattgccggcgtgcgagaagaagtcaccaaagccctcctcaggatcc
tatgcttggtcgaggattttgaggagattcgtgggcagcggctcgatgtggcgtcttctg
ggatgcaccaaggttctgacctccagtgatgtgtggttccttggcaaatgctacaaggtg
tcacctgaggagtcatccagcaactcggattccgaaagtgggcatgctgcatttttagaa
gatttctcttccaggatatggatcacataccgaaaaggctttgacgcaatatctgattcc
aagctaactagtgatgtgaactggggctgcatggttagaagcagtcagatgctggttgct
caggcgctgatttttcaccatcttggaaggtcttggagaaagcccccagagaagccatac
aacccacaatatataggggtcttacacctatttggcgattctgaagcttgtgctttctct
attcacaatttacttcaagctggaaagagttatggtctggctgctggatcatgggtgggg
ccatatgctatgtgccgggcatggcagacccttatccgcacaaatagagagcaggctgat
gctgttggtgggaaggaaaatttccctatggctctttatgtggtttcgggtgatgaagat
ggtgaaagaggtggagctccagttgtgtgcattgatgttgctgctcagctttgctctgat
ttcaacaaaggacaatcaacatggtcacctatacttttgttagttcctctggttcttggc
cttgacaaaattaatccaaggtacatcccattactaaaggagacatttacgtttcctcaa
agcttgggcattttaggtggaagaccaggaacatcaacttacattgctggggtacaggat
gagagggcgctctacctagatccccatgaagttcagatggcagttaacattgcaccggat
aatttggaggcagacacttcctcgtaccactgcagtgttgtccgagatttggctctagac
caaatagatccatccctggctattggtttttactgccgtgacaaagatgactttgatgac
ttctgttctcgggcctctgagttggtagagaaggccaatggagcgccactctttactgtt
gtgcagtcaatcgagccatcgaaacagatgtataaacaggatggtgggctgggttgttct
ggcagtagcatggccaatgacgatgaccttgatgactccggcgaagcaggagaagaggag
tggcagatcctctaa
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