Panicum hallii (Hall's panicgrass): 112899175
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Entry
112899175 CDS
T07366
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112899175
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112899175
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
TcdB_N
Motif
Other DBs
NCBI-GeneID:
112899175
NCBI-ProteinID:
XP_025823322
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All DBs
Position
7:44865666..44870785
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AA seq
834 aa
AA seq
DB search
MPRKHAPAFTPEAASASVVAGQPHNLPVLQAKMKRDPEGYEDELRQLHRHFESSVFLFRQ
QAALATTSASGGGGEVAKELGDLALFLAHVAPFYPDDLADLPDQIGGLLDTNARGLPPGL
RTHLVQALILLVNRKIVDLEDTMELFMELQVIGDRAVKKLAFSHIVHSIRRMNQKHKNDT
RNRKLQNILFKFLQAEEESRAKRAFTIVCDLHRRRVWFDERTTNAICDACFHPSSRIMIA
AISFLLGYENAEQEDDSDASSSEDEADQNPQILLSKQDVYKANHKGTAASKKKKKAKLQR
VIRSMKRQQRKSVDEAGSSYYSPLTYLKDAQGFAEKLFSRLQKCNERFEVRMMMLKVIAR
TIGLHHLVLLNFYPYLQRYVQPHQRDVTTLLAAAVQACHDMVPPDAVEPLFKQIVNQFVH
DKSRPEAIAVGLNVVREICMRMPLMMNEDLLQDLVLYKKSHEKAVSIAARSLITLFREIC
PSLLVKKDRGRPVDPKARPKAFGEVTVASDVPGAELLDENISSEGEGSDDESDAFDSDDE
TTLPSAPPGTEENMEGSDANKLDANEDTEEEDEASDDDGTDEGQDNSDNDIDDIDEELDD
DSDMDADTDMSDEDEDDEELKESINGSEDEGSDHDEDSDEGEKSNGSGSKVQKRKLSDYI
GELNAADASLRALKRLAGAKKAQVSSDETGKILSDEDFKRIKELKAKKEAKLALAQHGLI
KGVDTKSATFKMPSSDQLSRKRVDPLQLEAHVRRKMSKEERLAMVKAGREDRGAYVARAA
VKQKKTGGLSNKQKQHRKRMPLAATRAKAARSRQEKKQLRKRSGNQFRGRKAWK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaagcacgcgccggcgttcacgccggaggcggcctccgcctccgtcgttgct
ggccagccgcataacctcccggtgctccaggcgaagatgaagcgcgacccggagggctac
gaggacgagctccggcagctccaccgccacttcgagtcctcggtgttcctcttccgccag
caggcggcgctggccaccacctccgcatcgggcggcggcggggaggtggccaaggagctc
ggcgacctcgcgctgttcctcgcccacgtcgcgcccttctacccggacgacctcgccgac
ttgccggaccagattgggggtctgctcgacaccaacgcgcgcgggctgccgccggggctc
aggacgcacctcgtgcaggcgttgatattgctggtgaatcgaaagattgttgatcttgag
gacacaatggagttattcatggagcttcaggttattggagatcgagctgttaaaaagcta
gcattttcgcatattgtacacagtatcaggaggatgaatcagaaacataagaatgataca
aggaatcgtaaactgcagaacatcctttttaaattcttacaggctgaagaagagtcgcgg
gcaaagagggcatttactatagtgtgcgatcttcaccgtcggagggtctggtttgatgaa
cgcacaacaaatgcaatatgcgatgcttgcttccatccttcctctaggattatgatagct
gctatttcattccttcttggatatgaaaatgctgaacaagaggatgacagtgatgcatca
agcagtgaagatgaagcagatcaaaacccacaaattctgcttagcaaacaggatgtttat
aaggcaaatcacaagggcacagctgctagtaagaaaaagaagaaagctaaattacaacgt
gttattcgtagcatgaaaaggcaacagcggaaatctgttgacgaggctggttccagctac
tattcacccctgacgtatttaaaggatgcccagggttttgctgagaagcttttctcccgg
ctgcagaaatgcaatgaacgttttgaggtaaggatgatgatgttaaaagtaattgcgagg
actattgggctgcatcacttggttctgttgaacttctacccatatcttcaaagatatgtt
caacctcatcaacgagatgtgacaactttacttgctgcagcagttcaggcttgccatgat
atggtacctccggatgctgttgaaccactgttcaagcagatagtaaatcagtttgtgcat
gacaaatctcgcccggaggctattgctgttggcttgaatgtcgtgagagagatctgcatg
agaatgcctttgatgatgaatgaggatctgctccaagaccttgttttgtacaaaaaatcc
catgagaaagctgtttccattgctgctcgttcgctgatcactttgttcagagagatctgc
ccttcattgttagtcaagaaagatcgaggccgtcctgttgatccaaaggctcggccgaag
gcatttggtgaagtcactgtcgctagcgacgtgcctggtgctgagttgctagatgaaaac
atttcatcggaaggggaaggttcagatgatgagtctgatgcttttgattccgatgatgag
acaaccttgccatctgcccctcctggaacagaagaaaatatggagggttctgatgcaaac
aaacttgacgccaatgaagataccgaagaggaggacgaagcatctgatgatgatggtaca
gatgagggtcaagataactcggacaatgatattgatgatattgatgaagaattagatgat
gactctgatatggatgctgatactgatatgtctgatgaggatgaggatgatgaagaactt
aaggagagcataaatggttcagaggatgaaggttcagaccatgacgaagacagtgatgag
ggagagaagtctaatggcagcggctctaaggtacagaagaggaagttgagtgattatatt
ggtgagctgaatgctgctgatgcaagccttcgagctctgaagaggttagcaggagccaag
aaggctcaagtttcatcggatgaaactggtaaaattttatcggatgaagattttaagcgc
atcaaagagctcaaggcaaagaaagaggcaaaactggctttggcccaacatggactaatc
aagggtgttgatacgaaatctgcaacctttaagatgccatcttctgatcagctcagtagg
aagcgtgttgatccacttcagcttgaggctcacgtcagaagaaagatgtcgaaagaagaa
agattagcgatggtgaaagctggaagagaggatagaggggcatatgtagccagagcagct
gtgaaacagaaaaagaccggtggcctgagcaataagcagaagcaacacaggaagaggatg
cctctggcagcaactagagccaaggcagcgcgttctcggcaggagaagaagcagctgcgc
aagcgctccggaaatcagttcaggggccgcaaggcctggaaatga
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