Panicum hallii (Hall's panicgrass): 112899294
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Entry
112899294 CDS
T07366
Name
(RefSeq) chloride channel protein CLC-c-like isoform X1
KO
K05016
chloride channel 7
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112899294
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112899294
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phai04040
]
112899294
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112899294
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112899294
Ion channels [BR:
phai04040
]
Chloride channels
Chloride channel (CLC)
112899294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112899294
NCBI-ProteinID:
XP_025823493
LinkDB
All DBs
Position
7:complement(35994461..36002098)
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AA seq
794 aa
AA seq
DB search
MDGHHLPPSHQSPPAQPERRGSFNYDIESTDAAWRGAHTASEALLRYDDDGPREPLLRKR
TTNTTSQIAIVGANVCPIESLDYEIVENDLIKQDWRSRKKKQIFQYIVLKWSLVLLIGLC
TGLVGFFNNLAVENIAGFKLLLTGDLMLKKRYFTAFLAYGGCNLVLAASAAAICAYIAPA
AAGSGIPEVKAYLNGIDAYAILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANL
LGQGGSRKYHLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWR
SALLWRTFFTTAVVAVVLRGLIGFCRSGKCGLFGQGGLIMFDLSATIPTYSTQDIIAIIV
LGIIGGVFGGLFNFLLDRILRAYSFINEKGAPYKILLTITISIITSACSYGLPWLAPCTP
CPADAMEQCPTIGRSGNYKNFQCPPGHYNGLASLFFNTNDDAIRNLFSSGTEKEFHMSTL
FVFFTAIYCLGLVTYGIAVPSGLFIPVILAGATYGRIVGTLLGPISDLDPGLFALLGAAS
FLGGTMRMTVSVCVILLELTNDLLMLPLVMLVLLISKTIADSFNKGVYDQIIVMKGMPFL
EAHAEPYMRHLVAGDVVSGPLISFSGVERVGNIVQALRITGHNGFPVVDEPPLSEAPELV
GLVLRSHLLVLLKGKGFMKDKVKTSGSFVLKKFGAFDFAKAGSGKGLKIEDLDFTDEEMD
MYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRPPIVGILTRHDFMP
EHIHGVFPNLHKSH
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaccacttgccgccctcccaccaatcgccgccggcgcagccggagcggcgc
ggcagcttcaactacgacatcgagagcacggacgccgcatggcgcggcgcgcacacggcg
tcggaggcgctgctgcggtacgacgacgacggcccgcgggagccgctgctgcggaagcgc
accacgaacactacctcccagatcgccatcgtcggggccaacgtctgccccatcgagagc
ctcgactatgaaattgtggaaaacgaccttatcaagcaagattggagatcaagaaagaag
aagcaaatattccagtatattgttctgaaatggtctttagttcttctcattggcttgtgt
acgggacttgttggcttcttcaacaaccttgcggttgaaaacattgctgggttcaaactg
ttgctcacaggtgatctaatgctcaagaagaggtacttcacagcctttctggcatatgga
ggctgcaatttagtcttggcagccagtgctgcagcaatctgcgcttacatagctcctgct
gctgctgggtctggtatccctgaagttaaagcataccttaacggaattgatgcttacgct
atactagctcctagtacactctttgtgaagatatttggttcaatacttggagtttcagct
ggttttgtacttggaaaggaaggtccgatggtacatacaggagcatgcattgcaaacttg
cttggtcaaggggggtcacgcaagtaccatcttacatgtaactggctcagatattttaag
aacgatagagataggcgggatttgattacttgtgggtctgctgctggagttgcagcagca
ttccgtgcacctgttggcggtgtgctctttgctcttgaggaagcagcatcttggtggcga
agtgctctcctgtggagaacattctttacaactgctgttgttgctgttgtattgaggggc
ctgatcgggttctgccgtagtggaaaatgtggtctctttggtcaaggagggttgattatg
tttgatcttagcgcaacgatacctacttacagtacccaagatatcattgcaattattgtt
cttgggatcatcggaggggtatttggaggcttgttcaactttctcttggataggattctc
cgcgcctacagttttatcaatgagaaaggtgctccatacaagatccttcttacaatcaca
atatcgattatcacatcagcatgctcctatgggctcccttggctcgctccatgcactccg
tgcccagctgatgccatggagcaatgccccaccattggacgctctgggaattataagaat
tttcagtgcccaccaggtcactacaacggtcttgcatcacttttcttcaacacaaatgac
gatgccatccgcaatctgttcagcagtggcaccgagaaagaattccacatgtccactctg
tttgtcttcttcactgccatttactgccttggtcttgtgacatacggtattgctgtccca
tctggtcttttcatccctgttatacttgctggggctacatatgggcgcatagtggggacg
cttcttggtccaatatcagaccttgatcctggactctttgcacttctcggtgcggcatct
ttcctcggtggaacaatgaggatgaccgtctcagtttgtgtgatacttctggagctcaca
aatgacctccttatgctcccgttggtcatgctcgttcttctgatatcgaagactatagcc
gacagcttcaacaaaggagtttatgaccagatcatagtgatgaaaggcatgccattcctg
gaggctcatgccgaaccctacatgaggcacttggttgctggtgatgttgtatccgggcca
ctgatctccttttcaggcgttgagagagtggggaacattgttcaggcgttgaggatcaca
ggccacaatggatttccagtggtggatgagccacccctatcagaggctccagagctcgtt
ggactcgtgcttaggtcccatctgctggtcctgctgaaaggcaagggcttcatgaaagat
aaggtgaaaaccagcggtagcttcgtgctaaaaaagtttggtgcctttgattttgccaag
gctgggtctggaaaaggtttgaagatcgaggacctggatttcacagacgaggaaatggat
atgtatgttgatctccatccaattacaaatacctcaccgtacacggtggttgagaccatg
tcacttgcgaaggctgcagtccttttccgggcactaggattgagacacctgttggttgtg
ccgaagaccccagggagaccacctatcgttgggatcctgacgaggcacgatttcatgccg
gagcacattcacggggtgttcccgaacctccacaagtcacactaa
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