KEGG   Panicum hallii (Hall's panicgrass): 112899311
Entry
112899311         CDS       T07366                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112899311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112899311
   03400 DNA repair and recombination proteins [BR:phai03400]
    112899311
Spliceosome [BR:phai03041]
 Complex B
  Other components
   Prp19 complex
    112899311
 Complex C
   Prp19-CDC5 complex
    112899311
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112899311
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 C45G9_C TPR_HPS5_insect DUF5758 OSTMP1
Other DBs
NCBI-GeneID: 112899311
NCBI-ProteinID: XP_025823518
LinkDB
Position
7:30678358..30684285
AA seq 983 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPNDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFYDTVGEDKPPEHVQFPT
TIEDLEGKRRVDIEAQLRKQDIARNKILQRQDAPAAIMQANKLNDPEAVTRRSKLMLPPP
QISDHELEEIAKMGSAGDPALAEELGEGSTATRALLSSYSQTPRLGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGDNPDLHPSDFSGVTPRKEIQTPNPMATPLALASPGP
GVTPRVGMTPSRDGNSFVITPKATPFRDELRINEEVELQDSAKLELRRQAELRRSLRSGF
ASIPQPKNEYQIVMPPITEDEKEEAEERIEEDMSDRLARERAEEQARQEALLRKRSKVLQ
RSLPRPPAASVEVLRQSLIKGGESRSRSTFVPPTSLEQADDLINEELLRLLEHDNAKYPL
DEKTQKEKKKGNKRQANAAAVPEIEDLDEDELKEASSLVQEEIQYLRVAMGHENESFEDF
VKAHDACQEDLMYFPTKNSYGLASVAGNADKLSALQNEFEIVKKRMDEEAKKASRLEQKI
KLLTQGYQVRAGKLWSQVQDTFKQMDTAATELECFQELQKQEQLAASYRVRNLTEEVDKQ
KALERTLQSRYGDLMSVYHRIQEQLEEHKIQLRKQEAIEAENRAREEAAAQNCAAEEENE
RIRNVEVGKEHMNSVTDEEPAPAGSKQINEDQMDVDNNNVDGEFVGPIPPAPDTQGDIIE
ASAQENSSNAPSSDGVTTNGEACDMVDASKVESQDNASGSLLVDAGNQEDGKNSIPLVGA
SEGNAALSSDGAVTNEQNDMVPE
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgaggatcatgataaagggcggcgtgtggaagaacacggaggatgagatcctcaaggcg
gccgtcatgaagtacggcaagaaccagtgggcgcgcatctcgtcgctgctcgtccgcaag
tccgccaagcagtgcaaggcccgctggtacgagtggctcgacccatccatcaagaagact
gaatggacaagggaagaggatgagaagctactccatcttgctaaactcatgcctacacaa
tggaggaccattgcacctattgttggtcggacaccatctcagtgccttgagcgttatgag
aagctgcttgatgctgcttgtgcaaaagatgagaattatgaacctaatgatgacccgagg
aagttgcgacctggtgagattgatccaaatcccgagtcaaaacctgctcgtcctgatcct
gtcgatatggatgaagatgaaaaggagatgctttctgaggcaagggctcgattagctaat
accaggggcaaaaaggctaaacgaaaagcaagagagaagcaacttgaagaggctaggcgg
cttgcttcactgcaaaaaaggagagagctgaaggcggctggcattgatacacggcagcgg
aagagaaagaggaagggtattgattacaatgctgagatccctttcgaaaagaggccacct
ccaggcttttatgatacggttggtgaggacaagccacctgagcatgtgcagtttccaact
actattgaggatcttgaagggaagcggagagtggatatagaggcacaattgagaaagcaa
gatattgccaggaacaagattctgcagcggcaagatgccccagctgcaataatgcaagcc
aataaactcaatgaccctgaagctgtcacaagaaggtccaaactaatgcttccgccacca
caaatttctgatcatgagttagaggagatagcaaagatgggtagtgctggtgatcctgct
ctagctgaggagcttggcgaaggaagtactgccacaagagccttgctatccagctattcc
cagactccaaggcttggtatgacaccattgcgaactccacagagaactccagctggtaag
ggtgatgctattatgatggaggcagaaaatcttgcacgtttgagggagtcacaaacacct
cttttaggaggggataacccagatcttcatccatcagatttctctggtgttacaccacgt
aaggagatacagactccaaaccccatggcgacacccttggcattggcaagccccggtcct
ggtgtgaccccacgggttggcatgacgccctccagagatggaaattcctttgttataact
ccaaaagctacaccctttcgagatgagctccgcataaatgaagaggtggagttgcaggac
agtgctaagcttgagcttcgtagacaagctgagctaagaaggagtctgcgatctggtttt
gcttctattccacagcctaagaatgagtaccagatagttatgccacctatcacagaggat
gaaaaggaagaagctgaagagagaattgaagaggatatgtcggacaggctagcgagagag
agggccgaggaacaagcaaggcaggaggcattgcttagaaagagatccaaagtgttgcag
agaagtctgcctaggccacctgctgcctcagtagaggttctccggcagtctctgattaaa
ggtggtgagagcagaagcagaagtacctttgtgcctccaacatcacttgaacaggctgat
gatctaataaatgaggaactccttaggctccttgagcatgataatgctaaataccccctt
gatgaaaaaactcaaaaagagaaaaagaaagggaacaagaggcaggcaaatgcggcagcg
gttcctgaaattgaggatttggatgaggatgaattaaaagaggctagttctttggttcaa
gaggaaattcagtatcttcgtgtggccatggggcatgaaaacgaatcttttgaggatttt
gtgaaagctcatgatgcgtgccaagaggaccttatgtattttcctacaaagaacagctat
ggtcttgccagtgtcgctggaaacgctgataagttatccgctttgcaaaatgagtttgaa
attgtgaagaagagaatggacgaggaagctaagaaggcttctcgtctggagcagaagatc
aaacttctgacacaagggtaccaggtacgggctgggaaactgtggtcgcaggtccaagac
acattcaaacagatggatactgctgcaacagaacttgaatgcttccaagagctccagaaa
caagaacagttggcagcttcctaccgtgtcagaaacttgactgaagaagtggataaacag
aaagctttagaacgaacactccaaagccgctatggtgatttgatgtctgtttaccataga
atccaagaacagcttgaggagcacaagattcaacttaggaaacaggaggcaatagaagca
gaaaatcgtgctcgagaggaggctgcagcacagaattgtgctgctgaagaagaaaatgaa
agaatacgtaatgttgaagtggggaaagaacatatgaacagtgttactgatgaggagcct
gcccctgcaggaagcaagcaaatcaatgaggatcagatggacgtggacaacaataatgta
gatggggaattcgttggtcctattcccccagcaccagatactcaaggggatatcattgaa
gcttctgctcaagagaactcttctaatgctccaagtagtgatggtgtcaccacgaatggt
gaagcatgtgatatggtcgatgcatccaaggtagaaagtcaggacaatgccagtggcagt
ttgctcgtggatgctggcaatcaggaagatggcaagaatagcattccattggttggtgcc
agtgaaggaaatgctgctttatcctcagatggtgctgtcacaaatgagcagaatgacatg
gttcctgagtga

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