Panicum hallii (Hall's panicgrass): 112899331
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Entry
112899331 CDS
T07366
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112899331
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phai04812
]
112899331
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112899331
Cytoskeleton proteins [BR:
phai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112899331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
Adaptin_N
Sec7-like_HDS
TTI1
INTS1_R4
PDS5
UTP20
MMS19_C
V-ATPase_H_N
HEAT_DAAF5
Sec7-like_HUS
Dopey_N
DUF7217
RIX1
RRN3
CRM1_C
ELFV_dehydrog
Motif
Other DBs
NCBI-GeneID:
112899331
NCBI-ProteinID:
XP_025823547
LinkDB
All DBs
Position
7:complement(39118776..39129542)
Genome browser
AA seq
1443 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALDAAARRGLTGAEVTALVDTCMDLTRDANFRIAQ
GGLQALSAAAVVAGEHFKIHLNALVPAAVERLGDGKQPVRDAARQLLITLMEVSSPTIIV
ERAGSYAWTHKSWRVREEFVRTVSTAVGLFASTEISLQRVLLSPVLQLMNDSNQSVRDAA
ISCIEEMYKHMGSQFHEELQRHNLPSYMLKEINYRLDKIEPKVRSSDTAMQYKAAESRSV
SANPKRGSPRTKSIPRESTLFGGDTDITEKPVEPIKVHSEKELLREFEKIAATLVPEKDW
SLRIAAMQRIEALVYGGAIDYPSFLMLLKQLVPPLSTQLSDRRSSIVKQACHLLNILSKE
LLGDFEPCAELFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARILPRIVDTAKNDRS
AILRARCCEYALLVLEYWADAPEIQRSADLYEDMIKCCVADAMSEVRATARTCYRMFAKT
WPERSRRLFMSFDPAIQRIINDEDGGVHKRYASPSLRDRVAQPSRASSHASGTLVPGYGT
SAIVAMDKSAAISSDSSFSSNSLRLSQSKTIGRSSERSLESVLNSSKEKVSAIESLLKGV
SISGQNFSTARSTSLDLGVDPPSSRDPPVPLAAPASNVLSLQNSALLDSSLPAITAASSR
NGGSRLLDTMTTQLATKERSRSPYLSSMSSESMSGLSLPYSRRSSERLQEGGRMDESYDI
RSTRRIPQMHLEKNYVDMHYRDATHRDSHNNHVPNFQRPLLRKQVMSRASASGRHSFDDS
HVPSGDVSGYTDSLASLNDALSEGLSPSSDWVARVSAFDFIRNLLQQGQRGIQEITQNFE
KVMKLFFRHLDDPHHKVAQAAFSTLAEIIPACKKPFESYVERILPYVFSRLIDPKELVKK
PCSSTLDIVGRTYAIDMLLPALVRSLDEQRSPKAKLAVLEFANKSFSKYTVDSDGYSNSG
FLKLWLSKLAPLVNEKNAKLKEASISGIIAVYSHFDSTAVLNFILSLSVEDQNLLRRALK
IKTPRIEVDLVNYLQSKKERPRPKSYDQADFGTSSEDGYALTSKKSYPFGRYSSSSLDAE
GGKKTGTMQESTPHNVSIGRTTSDMSMDHGIQSLEPSTGTEAHLTRSREPKNNSSSVVEA
ARSWTNYPEKTDASLDGETASGTPRLDFSRFLTSDGHNTVGSTTEESVQEGDMIVSLSSI
KTSLHTDNGLSIPQLLHQISNDTEVSSSEKREALQQLVDASFDNNSSIWAKYFNQILSTV
LEVLDDSDSATRELALSLIAEMLNNQKDAIEDSIEIVLEKLLHVTKDVVAKISNEANQCL
NILLAKYDPFRCLAVIVPLLVSDDEKILVVCINCLTKLVGRLSQEELIDQLPTFLPALFD
AFNNQSPDVRKTVVFCLVDIYIMLGKAFAPYLEGLSSTQLRLVTIYANRISQARSGKPID
SNQ
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgccaaggacaccaaggagcgcctggcgggggtc
gagcggctgcacgaggcgctcgacgccgcggcgcgccgcgggctcacgggggccgaggtc
accgcgctggtggacacctgcatggatctgacgcgggacgccaacttccgcatcgcgcag
ggcggcctccaggcgctctccgccgccgccgtcgtcgccggcgagcacttcaagatccac
ctcaacgccctcgtcccggccgccgtcgagcgcctcggggacggcaagcagcccgtccgc
gatgccgcgcgccagctcctcatcacgctcatggaggtttcttcgccaacaataatcgtt
gaaagagctggaagttatgcatggactcataagagttggagggtgcgagaagagtttgta
cgtacggtgtccactgcagttgggctatttgcttctacagaaatttccttgcaacgagtt
ttgctttcacctgtcctgcaattgatgaatgattcaaaccaaagtgttagagatgctgca
atctcttgtattgaggagatgtacaagcacatgggttcacagtttcatgaagagttgcag
cgccataatctgccttcttacatgcttaaagaaataaattataggttggataaaatagaa
ccaaaggttcgatcatctgatactgcaatgcagtacaaggcagcagagtctagatctgtt
agtgctaatccgaaaagaggcagcccaaggacaaaaagcataccaagggaaagtacgcta
tttggaggtgacaccgacataacagaaaaaccagtggaaccaataaaagttcattctgag
aaagaattacttcgggagtttgagaagattgcagctacccttgttccagaaaaggattgg
tctttacgtattgctgccatgcaaaggattgaagccctcgtttatggaggtgcaattgat
tatccctcatttcttatgctcttgaagcaactggttcctccattgtccactcaactgtct
gatcgacgttctagcattgtaaaacaggcatgccatctacttaatatactatccaaagaa
ctccttggtgattttgagccatgtgctgaactttttatcccgatgctttttaagcttgtt
gtcataacagtgcttgtaatcgctgaatctgcagacacatgtatcaaaactatcctgcgg
aattgcaaggttgcaaggattcttcctcgcatagttgacactgcaaagaatgaccgaagt
gcaatcctccgtgcaaggtgttgtgagtatgcacttctggtactggagtattgggctgat
gccccagagatacaacggtcagctgatttatatgaagatatgataaaatgctgtgtagca
gatgcgatgagtgaggttcgcgcaactgcaagaacgtgctatagaatgtttgcaaagaca
tggccagagcgttcacgccggctttttatgtcatttgatcctgcgatacagaggataata
aatgatgaagatggtggtgtgcacaaaaggtatgcttctccctcgttgcgtgatagggtt
gcgcagccttctcgtgcttcatctcatgccagtggtacacttgtacctggatatggcact
tcagctattgttgcaatggacaagagtgcagctatttcttcagattcatctttttcatca
aacagtcttcggttatcacagtccaagacgattggcagaagttctgagagaagccttgag
agtgtgcttaactctagcaaagaaaaagtttctgccattgagagtttgcttaaaggtgtc
agtatatcagggcaaaatttctccactgcacgctccacaagcttggatcttggagttgat
cctccatcatctcgtgatcctcctgtgccacttgcagcgccagcatcaaatgttttatca
ttgcagaactcagcattgctggattcatcccttcctgccattactgctgctagttcacga
aatggaggttcccgcttattggatacaatgacaacacaattggctaccaaagagcgttca
agatcaccatatttgagtagtatgtcatctgagtccatgtctggcttgtcattgccttac
tcaagaagatcttcggagaggcttcaagaaggtggccgcatggatgagagttatgatatt
cgttcaactaggcgaatccctcaaatgcacttggagaaaaactatgttgacatgcattat
agggatgccacccacagagattcacataataatcatgtcccaaatttccagagacctctt
ctaaggaagcaagtaatgtcaagggcttctgccagtggcagacacagctttgatgacagc
catgtaccatctggtgacgtgtctggctatacagattctctggcttctctaaatgatgca
ctttctgagggtctcagccctagttccgactgggtagcaagagtttcagcttttgatttt
attcggaatttattgcaacaaggccagagaggtattcaagaaatcacccaaaattttgag
aaggtcatgaaactcttcttccgtcatttggatgatcctcatcataaggttgcacaggca
gctttcagtacacttgcagagattatcccagcttgcaagaagccatttgaaagctatgtc
gagcggatattgccatatgtattttcacggcttattgatccaaaagagttggtgaaaaaa
ccatgttcctcaacattggatattgttggtcggacatatgctattgatatgttgctacct
gcactagtacgctcattagatgaacagagatccccaaaggcaaaattggctgttcttgag
ttcgcaaataaatcattcagcaagtacactgtagattctgatggttatagtaacagcggc
ttcctcaaactatggctttcaaaattggcacctttagtaaatgaaaagaatgcaaaattg
aaggaggcatctatttctggtatcatagctgtttattctcacttcgattcaacagcagtg
ctaaattttattctcagtttatcagttgaagatcaaaacctcttgaggcgagccctgaag
atcaaaacacctcgtattgaggttgatcttgtgaactacttgcagagcaagaaagaacgt
ccacgccccaaatcttatgaccaggcagattttggaacttcttcggaagatggctatgca
ctcacatccaagaagagctatccttttgggcggtattcttctagttcccttgacgctgaa
ggaggaaagaagaccggtacaatgcaagaatcaactccgcacaatgtctctataggtcga
acaacttctgatatgagcatggatcatggtattcaaagcttggagccatcaacaggaact
gaagctcatttaactaggagcagagagccgaagaataacagtagttcagttgtggaagct
gctcgctcttggacaaactaccctgaaaaaactgatgcctccttagatggtgaaactgct
agcggtactcctcggttagatttcagccggtttcttacttctgatgggcataatactgtt
ggttcaaccactgaagaaagtgttcaagagggagatatgattgtgagtcttagttctata
aagaccagtctgcacactgacaatggtctgagcataccgcaacttcttcatcagataagt
aacgatactgaagtttcaagctcggaaaagcgggaagcgctgcaacagttggttgatgct
tcttttgataacaacagctccatttgggcaaagtacttcaatcaaatcttatcgactgtg
cttgaggtattggatgactctgattcagccacgagggagcttgctctgtccttaattgct
gagatgctcaacaaccagaaagatgcaattgaagactctattgagattgttctcgagaag
ctccttcatgtgaccaaagatgttgtggctaagatttcaaatgaggcaaaccaatgctta
aatattctgttggcaaaatatgatcctttcagatgtcttgctgttatagtacctttattg
gtcagtgatgatgagaagatacttgttgtgtgtatcaactgtttgacaaagcttgttgga
cgcctttcccaagaggaattgatcgatcaattacctacatttttgccagcgttgtttgat
gcttttaacaaccaaagtccagatgttcgaaagactgttgtgttctgcctggtggatatc
tacatcatgcttgggaaagcatttgctccatacttggaagggcttagcagcacgcagctg
cgcctagtaaccatctatgctaaccggatttcacaggcgaggtctggcaaaccgattgat
tctaaccaatga
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integrated database retrieval system
