KEGG   Panicum hallii (Hall's panicgrass): 112899487
Entry
112899487         CDS       T07366                                 
Name
(RefSeq) cyclin-T1-2-like isoform X1
  KO
K15188  cyclin T
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112899487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phai03021]
    112899487
Transcription machinery [BR:phai03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112899487
    Brd4/P-TEFb complex
     112899487
    7SK RNP complex
     112899487
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C TFIIB Cyclin_C Cyclin_C_2
Other DBs
NCBI-GeneID: 112899487
NCBI-ProteinID: XP_025823765
LinkDB
Position
7:complement(44629681..44634581)
AA seq 604 aa
MDGEPKILEKLSHERMYSWYFTREELEKFSPSRKDGITETKESELRHLYCSFIRDVGIRL
KLPQMTLATAIMFCHRFYIHQSLAKNGWQTVAAVCVFLASKAEDTPCPLDHVVRVAYETM
YRRDTAAAQRIRQKDVFEKQKALILIGERLVLTTIRFDFNIQHPYRPLFDAMRNLGINQK
EVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKLHNIKLPLHGAHVWWHQFDVAPK
PLEAVIQQMMEHAAVKKLMPARPSPVKQKEVPCEAKLHISNSPDSVLNQSSLLISSSSPD
IGEPSDPMQLDSCQYLISSHTIDGRVSGPDSSSLSVRAYINVSREVHDEESLDQASLTKH
DDGMMSHSNQTSLDAIAATEGSAECMKQDVSHGTVNGKNLNQASRNWHGGNVHPLPVVIS
LDAKVGQESTWCVEPLIGSSNHCTDSLIVDSLCTDQRLADAAPGPINDAPSASPVVVEAD
PLRAELKKVDVARIKDLLSKRKRQREIQERAIGSDDLSEEAWIERELESGIVIKQEAAAS
DGLSDEAWIERELEAGIVVGPRNKQAITLDGLSEDDWIERELESGIIVEPASASKKQKLE
SSCC
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggatggggaacccaagatccttgagaaattatcacatgaacgcatgtactcttggtac
ttcaccagggaagaactagagaagttttctccatcaaggaaagatggaattactgaaacc
aaggagtcagaacttcggcatttatattgttcatttattcgggatgttggcatcaggctg
aaactacctcagatgactctagcgacagcaataatgttttgccaccgcttctatatacac
cagtcccttgccaaaaatggatggcagacagttgcagctgtatgtgtatttctggcatcg
aaagctgaagatactccttgccccctggaccatgttgttagagtagcctatgagacaatg
tataggcgggacactgctgcagctcaaaggatccgccagaaggatgtttttgagaagcag
aaagcactaattttgatcggagagagattggttcttacaactattcgatttgatttcaac
attcagcatccttatagaccactttttgatgctatgagaaatcttggcatcaatcagaag
gaagtgaaacaagtagcatggaactttgtgaatgattggcttaaaacaacactgtgccta
cagtataaaccacagtatattgctgctggatctctttacctggcggcaaagcttcacaat
atcaagcttccgttacatggagcgcatgtctggtggcaccaatttgatgttgcaccaaag
cctctggaagctgtcattcagcaaatgatggagcatgctgctgtgaaaaaactgatgcct
gctcgtcccagtccagttaagcaaaaggaagttccatgtgaagctaaactgcacatatct
aacagcccggactctgtgttgaatcaatcaagcttgttaataagcagctcaagtcctgat
attggcgagcccagtgacccaatgcagctggattcctgtcaatacttgataagcagtcat
acaattgatggtagggtctcaggtccggacagcagttcgttgagtgtaagggcttatata
aatgtttctagggaagtacatgatgaagagagcttggatcaggcctcactaaccaaacat
gacgatgggatgatgtcacatagtaatcagacatcattagatgcaattgcagccactgag
ggcagtgctgaatgtatgaagcaggatgtaagccatggcacagtcaatggcaaaaacttg
aaccaggcatcaagaaattggcatggtggtaatgtgcacccattacctgtggtgatatca
ctggatgccaaggtgggccaagaaagcacttggtgtgtcgaaccattaattggaagctct
aatcattgtactgacagtctcattgtggatagcttgtgcactgatcagagattggctgat
gctgctccaggccccattaacgatgcaccatccgcatcgccagttgtggtggaggctgat
cctttgagggcagaacttaaaaaggttgatgttgccagaataaaggatttattgtcgaag
aggaagaggcagagagagatccaagagcgagccattggttcagacgacctcagtgaagaa
gcctggattgagagagagcttgagtctgggattgttataaaacaagaagctgctgcctca
gacgggctgagtgatgaagcctggatcgagagggagctcgaagcagggattgtggtcgga
ccaagaaacaagcaggcaatcactttagatggtttgagtgaagatgattggatcgagaga
gagctcgagtctgggattattgttgagccagcgtctgccagcaagaaacagaagctagaa
tcaagctgctgctag

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