Panicum hallii (Hall's panicgrass): 112899579
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Entry
112899579 CDS
T07366
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phai01001
]
112899579
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112899579
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112899579
Protein kinases [BR:
phai01001
]
Serine/threonine kinases: Other
Other
112899579
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112899579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
LisH
ARM_ARMC5
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
112899579
NCBI-ProteinID:
XP_025823886
LinkDB
All DBs
Position
7:complement(47791451..47799880)
Genome browser
AA seq
1907 aa
AA seq
DB search
MPETDPAAAPDEPASAPPQEDEEALLARAQNVISRILEREHDPNPNPRLLHTLATMCELH
EARYLQLSASNPTPNNTNTRSTYTIGKLANLFRDNDDFYELVFCKFLSDTSYSVAVRAAA
ARLLLSCHSTWTPQYPHAFEDSIIENIKKWVTEDSEASSECEWKYLGRNKPTDAEMLRTY
AIGLLAMALCSGGQLVEDVLNMGVSAKLMHFLRVRVLGDASSSQKDSNHPQDTKHPRGRD
DSRSKSRLAQDVSRLDGTRVGCGILTDLTSEKDNEPGVGMRQVHGERSVDDTVALLDNSD
APEADRVNDRSYGTSICDVKSKFGEKHSVIRLVKDEDISENGELLKRKLNRATSRLRVKG
KAGESLPETEITPLSPTSGLRIGGRAIRDRNAVRVDDPKKATDVNDRSAGLESFNAISRE
EYEDRFRDCIIGLKDISDIVLKAVRAAESEARSANAPDDAVKAAGDAAAELVKSAALEVW
KSESNGDAVVLAAEKAASAVVEAAVSTSVSRSSNQVGEERAVEEAVQTSKDQDLENFVIS
DQGQLLQLREKYSIQCLQILGEYVEALGPVLYEKGVDVCLALLQRSMKEHEGHHHFALLP
DVLKLICALAAHRKFAALFVDRGGIQKILSVPRINQTYMGLSACLFTFGSLQSTMERVCA
LPSDTLDSVVELALQLLKCPQDLARKSAAIFFAAAFVFKAVLDLFDARDGMQKLLDILYG
CASGRSGGNSGGLGSSHINQGNDQSPAEVLTASEKQVAYHSCVALRQYFRAHLLQLVDSI
RPSKSIRSIARNTSSARAGYKPFDISNEAMDAVFRQIQRDRKLGPALVRARWPVLDKFVA
SNGHMTMLELCKFQAHGDRYLRDLTQYAIGVLHIITLMPHPNVRKPIVHATLSNNRVGMA
VLLDAVKSFDYIDHEVICPALNVLVNLVCPPPSISNKPSSTANQQPAAAQALVSESRDRN
FEKSVSDRNLLANQGESRERSADVNPSERNNTLHQGTPCTPVVPSGVVGDRRITLGVGVG
GPGLAAQLEQGYRQAREVVRANNGIKILLQLLSSRMVTHPVAIDSIRALACRVLLGLARD
DAIAHILTKLQVGKKLSELIRDTSAQTLGGDSGRWQAELTHVAIELIGVLTNSGKETTLA
ATDAAAPALRRIERAGIAAATPISYHSRELMQLIHEHLLGSGFTATAAMLQKEAGLAPLP
LTAAVLPAHQVSALEASSVQQQWPSGRVQGFLSEKTNISTDQSDQRSDSVLPSSKKKALT
FSSSFSQRTLSPHPISGNRASNTLKSPVPIGADTGDAETLHKTPLSLPLKRKFVDVKDQS
SASSVKRPATADQIYQPSAFQTPAPTRKGLSVAVDSPTSFNCGRTNFNNISTDNLDNSQG
TPGAVTTTAHPGVIDQQSGNLERMTLDSLVVQYLKHQHRQCPAPVTTLPPLSLVHPHVCP
EPSRSLSAPANISARMGSREISRQFSGIQIPRRDRHFIYSRFKQCRVCRDEASLLTCMTF
LGDASRVAAGNHTGELRIFDCNTANLLETQTCHQHLVTMMESTYSGGNELILTSSLNEVK
IWDAFSVSGGPLHTFEDCKAARFSHSGTLFAALSTDTAQREIQLYDVQTYALTQRLPDNT
NNSSSGRGYIQPIIHFSPSDTMLLWNGVLWDTREANPVHQFDQFTDYCGGGFHPAGNEVI
LNSEVWDLRKFKLLRSVPSLDQTVIKFNGTGDVIYAILRRNLDDVTSSINARRVRHPLFP
AFRTIDAVTYSDIATVQIDRCVLDLATEPNDSLIGVVAMDDHQELFSSARLFEVGRKRIT
DDDSDPEDAGDTDDEDDDDNSDDGVVLAPVLEGESDSEDLSNSSDDGGDDDIPSSDEIED
DPEFIDDGDLDGGGGLLDIMGDAEGEDDESDDMMGSFSSGDEDGWIL
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacggaccccgccgccgcccccgacgaacctgcctccgccccgccacaagag
gacgaggaggcgctgctcgcccgcgcccagaatgtcatctccaggatcctcgaacgcgag
cacgaccccaaccccaatccccgcctcctccacaccctcgccaccatgtgtgagctccac
gaagccagatatcttcagctatctgcatctaaccctacgcctaacaacacaaacacaagg
agcacctatacaattggcaagctagcaaatctgttccgggataacgacgacttttatgag
ttggtgttttgtaagttcttgtcggatacatcctactctgttgccgtacgtgctgctgct
gctaggctgctcctgagctgccattctacttggacgcctcagtatccccatgcttttgaa
gactctatcatagagaatattaaaaaatgggtaacggaggattctgaagcgtctagtgaa
tgtgaatggaagtatctaggaagaaataaacccacagacgctgagatgttgagaacatat
gccattgggttgctcgctatggcgttgtgcagtggtgggcaattggtggaggatgtcttg
aatatgggggtatcagcgaagctcatgcactttttgcgtgtaagagtccttggggatgcc
tcatcttctcagaaagattctaaccatccacaagacaccaagcatcctcggggcagagat
gatagcaggagcaaatcacgtctggctcaagatgtttctcgactggatggaacaagggtt
gggtgtggaatattaaccgacctaacttcagagaaggacaatgaacctggtgttggaatg
aggcaagtacatggagaaaggtcagtggatgacactgttgcattgttggataattctgat
gcccccgaggctgatagggtcaatgatcgatcttatggtacaagtatttgtgacgtaaag
tcaaaatttggggaaaagcattctgtgatcaggcttgttaaagatgaagatatcagcgaa
aatggtgaactattgaagagaaagctgaatcgagccacttctcgacttagagtgaagggc
aaagctggtgaaagcttgcctgaaacagaaataacgcctttatcgccaacctctggattg
agaataggaggtcgggctatcagagacaggaatgcggtgagggttgatgacccaaagaag
gcaactgatgtgaacgatagatctgcaggtcttgagtcatttaacgctatttccagggaa
gaatatgaagaccggttcagggattgcattattggcttgaaggatatatctgacattgtt
ttgaaggcagtgagagccgctgagtccgaggccagatctgcaaatgcacctgatgatgct
gtaaaagcagcaggtgatgctgctgctgagcttgtgaaatctgctgctttggaggtttgg
aaaagtgaaagtaatggtgatgcggttgtattagctgcagagaaagctgcatctgctgta
gtagaggctgccgtgtcaacaagtgtctcacgaagctcaaaccaagtcggcgaagagcgt
gcggtggaagaagctgtgcaaaccagcaaagaccaggatttggaaaattttgttatcagt
gaccaagggcagctcttgcaacttagagaaaaatatagtatccagtgtctacagattttg
ggagagtatgttgaagctttgggtcctgttctctatgaaaaaggtgttgatgtttgcctt
gcattattgcaaaggagcatgaaagagcacgagggacaccaccactttgctctacttcct
gatgtccttaaattaatttgtgcactggctgcccaccgaaaatttgctgctctctttgtt
gatcgtggtggtattcagaagatcctctctgttcctaggattaatcagacatatatgggt
ctttctgcttgcttatttacttttgggtctcttcagtctaccatggaacgtgtttgtgca
ctcccatctgacacacttgacagtgttgttgaactagcacttcaacttcttaagtgccca
caagatttagctagaaaaagtgcagccatttttttcgctgctgcttttgtgttcaaagct
gttctggatttgtttgatgcacgagatgggatgcaaaagcttcttgatatcctatatgga
tgtgcgtctggaagatctggtggtaactccggcggactaggatcctcccacataaatcaa
gggaatgatcagtcgcctgccgaagttttgactgcatcagagaagcaagttgcataccat
tcatgtgttgcactgcggcaatactttagagctcatctccttcagcttgttgattccatt
cggccaagcaaaagcatccgtagtattgctcggaacacttctagtgcaagagctggttac
aaaccttttgacattagcaatgaggccatggatgctgtctttcgtcagatccagcgggac
agaaagttaggccctgctcttgtgagagctcgttggcctgtgctggacaaatttgtggcc
tcaaatggtcacatgactatgctagagttatgcaagtttcaggcacatggcgatcgatat
ctgcgtgacctaactcaatatgcaattggagttcttcacattataacacttatgccacac
ccaaacgtccgcaagccaatagtgcatgcaacattaagcaacaatcgtgttggtatggct
gttctattagatgctgtgaaaagtttcgactatattgatcatgaggtgatctgtccagca
ttgaatgttctcgtcaatcttgtatgcccacctccatctatcagtaacaagccatcctca
actgccaatcagcaacctgcagctgcgcaagcacttgtttcagaaagcagagacaggaac
ttcgaaaaaagtgtttcagataggaatcttctagcaaatcagggtgaatctcgtgaacga
tctgctgatgtcaacccttctgaaaggaataataccttacatcaaggaactccctgcaca
cctgttgtgccatctggagtagtcggtgatcgaagaataacgttaggagttggagttggc
ggtcctggtcttgctgctcaattggaacaaggatatcgtcaagctcgtgaagttgtaaga
gcaaacaatggcataaaaattcttttacagcttctcagttctcggatggttacacatcct
gtggctatagattctattagagcccttgcctgccgtgtcctgctgggtctagccagagac
gatgcaattgcacatatactgacaaagctccaggtgggcaagaaattatcagaactgatc
cgtgataccagtgcccagacgttggggggtgatagtggaagatggcaagctgagctgacc
catgtggcaattgaactaattggggtcttgacgaattctggaaaagaaacaacattagca
gcaactgatgctgctgctccagcactgaggcgcattgagcgagctgggatagctgctgct
actcctatctcctaccactcaagggaactgatgcagctaatacatgaacatctccttggg
tctggtttcactgccactgccgccatgctgcagaaggaggctggccttgcacctttgcca
ttgacagcagcagtgcttcctgctcaccaagtttctgccctagaagcatcatctgttcag
caacagtggccctctgggcgtgttcaggggtttctctcagagaaaacaaatatatccaca
gatcagtctgaccagagatctgattctgtcctgccttcatctaagaaaaaggcactaacc
ttctcatccagtttctcacaaagaactctatctccgcatcccatttctggtaatagagca
agcaacacccttaaaagtcctgtacctattggggctgatactggagatgcagaaacattg
cataaaacaccactgtcactgccacttaagaggaagtttgtggacgtgaaggatcaaagt
tctgcatcatcagtgaaacgccctgcaacagctgatcaaatataccaaccttctgcattc
caaactcctgctcctactcgcaaaggtctgtcagtagcagtagattctcctacttcattt
aattgtggtcggacaaacttcaacaacatttctactgacaacttggacaattctcaaggc
acgccgggagcagtgacaactacagcacatcctggtgtgattgatcaacagtcaggaaat
ttagagcgaatgacgctcgattcactggtggtacaatacttgaaacatcaacatcgtcag
tgtcctgctccagttacaactttgccaccactttctctagtgcacccacatgtttgcccc
gagcctagtcgcagccttagtgcaccagcaaacatatctgctcgtatgggaagccgtgag
ataagcaggcaatttagtgggatccagatacctcgtagggatcgtcattttatatacagt
cggttcaagcaatgtcgtgtttgccgtgacgaggcttcactgttgacttgcatgacattt
cttggagatgcatctcgagttgcggctggtaaccacacaggtgaattaagaatatttgac
tgcaacacggcaaatctcttagagacccaaacatgccaccaacatcttgttacaatgatg
gagtccacatattctggtggaaatgagctgattctcacatccagcctaaatgaggttaag
atctgggatgccttctcggtatctggggggcctttgcacacatttgaggattgcaaagct
gctaggtttagccactccggaactttatttgctgccctttctactgatacagctcaacgg
gagattcagttgtacgatgtacagacatatgctcttactcaacgccttccggataacact
aacaattcaagttcaggccgcggttacatccaacctattatacattttagtccttcagac
acaatgttgctttggaatggagtcctgtgggatacacgagaagcaaatcctgttcatcag
tttgaccagttcacagattattgtggcggtggcttccatccagcaggaaatgaggtgatc
ttaaactcagaggtgtgggatctgaggaagtttaagcttttgaggagtgtcccttccctg
gaccagacagtaataaagtttaatggcactggtgatgttatctatgccatcctgaggcgt
aatcttgacgacgtaacatcatccatcaatgctcgtagggtcagacatcctcttttccct
gcattccgcacgattgatgccgtgacttactcggatattgcaactgttcaaattgaccgc
tgtgtccttgatcttgccactgagcccaatgattctcttatcggggtggttgctatggat
gatcaccaggagctgttctcttctgctcgcttgttcgaagttggcaggaagcgaataact
gatgatgattcagatccggaggatgcaggtgacaccgacgatgaagatgatgatgacaac
tctgatgacggtgttgtgcttgctcccgtgctggaaggggaatcggattctgaggatcta
agtaacagcagcgatgatggtggcgatgatgatatccccagttcggatgaaattgaagat
gatccagagttcattgatgatggtgaccttgatgggggagggggcttgttggatattatg
ggtgatgctgaaggggaggacgatgaaagtgatgatatgatggggtccttcagcagtggt
gatgaggatggttggatattgtag
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integrated database retrieval system
