Panicum hallii (Hall's panicgrass): 112899635
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Entry
112899635 CDS
T07366
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112899635
KO
K07456
DNA mismatch repair protein MutS2
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112899635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112899635
DNA repair and recombination proteins [BR:
phai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112899635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Amidohydro_1
Smr
Amidohydro_3
DHOase
MSSS
Cluap1
ANGPTL8
Motif
Other DBs
NCBI-GeneID:
112899635
NCBI-ProteinID:
XP_025823965
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All DBs
Position
7:47330788..47339401
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AA seq
1156 aa
AA seq
DB search
MPGLIDVHAHLDEPGREEWEGFSTGTRAAAAGGITTLVDMPLNSFPSTVSEETLKLKLEA
ARDKLFVDVGFWGGLVPENAFNPSALESLLNAGVLGLKSFMCPSGINDFPMTNSTHIEEG
LVTLAKYQRPLLIHAERIPDDEDDDGLDGELDPRSYATYLKSRPPAWEESAIRDLQRAMK
DTEAGGRSEGAHIHIVHLSDAKASLELMKDAKRTGASVTVETCPHYLAFSADEVPDGDTR
FKCAPPIRDGMNRENLWKALLDGHIDMLSSDHSPSAPDLKLMEEGNFLKAWGGISSLQFV
LPVTWSYGKKYGITLNQLAAWWSENPAKLAGQKNKGAILPGYHADIVVWKPEAQFELDDS
HSVYHKHRNISAYLGKELSGKVLSTFVRGNLVFAEDKHAKAACGATILAKXDRSTKRILS
LRVDSSSSRYSPLLDVLQGCDFLTELVQRIEFCLDSTLSLVLDRASKNLETIRRERRRNI
EMLESLLKDTASKIFQAGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYF
MEPRDAVELNNREVKLSGDERAEELVILGLLTSSIVDSQLKIRNLMDRILELDLAIARGS
YALWTNGVKPSFSDSYSSSQSDQSSDYSVYIEGIRHPLLLEHSLMAEDSTIEASEMPVPL
DLWVKKDARIVVISGPNTGGKTATMKTLGLSSLMSKAGIFFPAKGRPRIPWFDQVLADIG
DHQSLEHSLSTFSGHISRLRRIVEVVSKDSLVLIDEIGSGTDPSEGVALSTSILKFLASK
VNLAIVTTHYADLSCLQSVDSRFENAAMEFCLETLQPTYRILWGTTGNSNALSIAKSIGF
DQKVLDRAQEWVEKLLPDKQKERQGLLYDSLLDERNLLESQANEAASVLSQVEGLYNEIR
LEADDLESRVAALRTRETQNVQQELKVVKSQMDTIIKNFEVQLKNSKLEQYNSLMRKAEA
ATASVVAAHQPNEITFNDDENQSLFVPQIGDKVYIQGLGGGTMATVIETLGEDGSCIVQY
GKIKVQVKRSKMKLVQQGTNETATSSSVKPKGRTPKQRSAAAETNQSQDGSVSFGPVVQT
SKNTVDLRGKRVSEASYELQMAIDSCRPCQVLFVVHGMGTGAVKDCAIDVLRNHPRVAKF
EDESPLNYGCTVAYIQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcccggactcatcgacgtgcatgcccatctcgatgagcctggacgcgaggagtgggag
ggcttctccactggtacaagggctgctgctgcaggtgggataacaacgctagtggacatg
ccactcaacagctttccatcaacagtttctgaagaaactctcaagctgaagctcgaagca
gctcgggataagctatttgttgatgtagggttctggggtggccttgtgccagagaacgcc
ttcaatccaagtgctttggagagcctcctaaatgcaggagttttaggactaaagtctttt
atgtgcccctcaggcatcaacgactttcccatgacaaattcaacccatatcgaggaagga
ttggttacactggcaaaataccagagacctttacttatccatgctgaacgtatacctgat
gatgaggatgatgatggactcgatggtgaactagatcctcgatcctatgcgacgtatctg
aagtctagaccaccagcatgggaggaatcagctatcagagatttgcaacgtgcgatgaag
gacacagaggcagggggtcggtcagaaggagctcatattcacatcgttcatctgtcagat
gcaaaagcttcccttgaacttatgaaggatgctaaacgcactggtgcaagcgtgactgta
gaaacatgtcctcattacctggcattttcagctgacgaagttccagatggggatactcgc
ttcaaatgtgcccctcctatacgtgatggcatgaacagagaaaatctttggaaagctctg
ctcgacggacacatagacatgttaagctcagaccactcaccatcagctcctgatctcaaa
ctaatggaagaaggcaactttttaaaggcatggggaggtatatcatcattgcagtttgtt
ctccctgtgacatggtcgtatgggaaaaagtacggcattactttgaatcaactagccgca
tggtggagtgaaaatccagctaagcttgcagggcaaaagaacaagggagctattctgccg
ggataccatgctgacattgtagtatggaaacctgaggcacagttcgaacttgatgacagc
cattctgtgtaccataaacaccggaatatttctgcatatttagggaaagaactttctggt
aaggtcctgtctacttttgtgagaggaaatcttgtgtttgcagaagacaagcacgcaaag
gccgcctgtggtgctacaatcctcgctaagtaagatcgcagcacaaaacgtattctatct
ttacgcgttgattcatcttccagcaggtactctcctcttctggatgtactgcaaggttgt
gacttcttgactgaacttgtgcaacggatagaattttgccttgattccactctttctctg
gtcctggatcgcgccagcaagaatctagaaacaattcgcagagaaaggaggaggaacatt
gagatgttagaatctctgttgaaagatacagcttcaaagattttccaagctggtgggatt
gatagtcctgtggtcactaagcgccgttctaggatgtgtgttggtgtgaaagcttcacac
aagcatttggtgcctggtggaattgttctaagttccagcggctctggtgcaacgtacttt
atggagccgagggatgctgttgagcttaacaacagggaagttaaactctcaggtgatgag
agagcagaggaattggtaatattaggcttgctaacttcaagtatcgtagactcccaactg
aagatcagaaatttgatggacaggattttggaattggaccttgccattgctagagggtcg
tatgcactatggacaaatggtgtcaaaccaagcttcagtgacagttatagcagcagccag
tcggatcagagcagcgactattcagtttatattgagggcattcggcatcctttgctactt
gaacattctctcatggcagaagattcaactatagaagcatctgaaatgcctgttccattg
gacttgtgggtgaaaaaggatgcaaggatagttgtgatctctggacccaacactggaggc
aaaactgccactatgaagaccttggggctgtcctcacttatgtcaaaagctggaattttc
ttcccagccaaaggaaggcctaggattccatggttcgatcaggttcttgcagatattggt
gatcaccagtcgctggagcacagcctctctacattcagtgggcacatatcacgcctgcgc
aggattgtagaagttgtatcaaaagattctctagttttaattgatgagattggaagtggc
actgatccatcagaaggtgtagctctttcaaccagcattttaaagtttcttgcaagtaaa
gtgaacttggccattgtgacaactcattatgctgatctaagttgtctccagtcagttgat
agcagatttgagaatgctgcaatggaattttgtttagaaactctgcaaccaacatatcga
atcttatggggcactactggtaattccaatgcacttagtattgcaaaatcaatcggtttt
gatcaaaaagtgcttgatcgcgcacaagagtgggttgagaagctgttgcctgataagcaa
aaggaacgccaaggtttactttatgattctctcctcgatgaaagaaaccttttggagtct
caggcaaatgaagctgcatctgttctttcacaagttgaagggttgtacaatgagattcgt
ttggaagctgatgatcttgaaagtcgagtagctgctttgaggacaagagagacccaaaat
gttcaacaagaactaaaggttgtgaagtctcagatggacacaataattaagaactttgaa
gttcaactgaagaattcaaaacttgaacaatacaattcactaatgaggaaagcagaagct
gccactgcttcagtggttgctgctcatcagccaaatgaaataactttcaacgatgatgaa
aaccagagtttgtttgttccgcaaattggagacaaagtgtatatccaaggattgggagga
ggaactatggctactgttattgaaactcttggagaagatgggagctgcatcgttcaatat
ggaaagataaaggttcaagtcaagagaagcaagatgaaattggttcaacaaggtacaaat
gagacagcaacttcctcttctgtaaaaccaaagggccgaacgccgaagcagcgatctgca
gcagcggagacgaaccagagccaagatggcagcgtctctttcggccccgttgtgcagacg
tccaagaatacggtggatctgcgcgggaagcgggtgagcgaggcgtcctacgagctccag
atggccatcgactcgtgcaggccttgccaggttctcttcgtggtccatggcatgggcacc
ggagccgtgaaggactgtgccattgatgttctccggaaccaccctcgagtggccaagttc
gaagacgagagtcctctcaactacggctgcactgtggcctacattcagtaa
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