Panicum hallii (Hall's panicgrass): 112899741
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Entry
112899741 CDS
T07366
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112899741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112899741
03029 Mitochondrial biogenesis [BR:
phai03029
]
112899741
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112899741
Atg1 complex
112899741
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112899741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112899741
NCBI-ProteinID:
XP_025824121
LinkDB
All DBs
Position
7:complement(40596674..40600903)
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AA seq
500 aa
AA seq
DB search
MSGMSDSAGGGRAGAELMVEQFHLKVLHAVLAVRAPCPLAAAAAPAAASAFRKRDRWFHL
PLHDPPPPPEAADRLEPLAPGEPLVVDVLLSPAGVGAGAGAGGEVVERWTVACEPWPDAA
GGEEVAVNRAYKHCFTLLRSVYAVLRVLPAYRVFRLLCANHSYNYEMVHHVDTFAEPFSR
PQEAAMRSHRFIPVETQLGRLVVSVQYLPSLASFNLEITSLSPSRIIPDYVGSPAAEPMR
AFPASLTEATGSAFPPSYQLQRPHSWAPPVFWPYTPAQQVFYASPTPSPPHFPGGYLQKR
LTRGESAPMPIPQLVERRSPVHRQNTLPPPSPRRGDMGAAGAQESPSEMGRLIGRLSPRH
KGKDNKDESGRFSALSSCDSPRQDDLDDYPFFVDDVDPPVSQPGSSDGKETSDQAGSSSH
KSQDAQVGSLVYLLRNARPLRDPSYSLQTSRAESSEAASASSTTSRRTSDALEELQSFKE
IRERLQSRSSAKHQEPPGKP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggatgtccgactccgcggggggcgggcgcgccggcgcggagctgatggtcgag
cagttccacctcaaggtgctccacgccgtcctcgccgtgcgcgcgccttgcccgctcgcc
gccgcggcggcgccagcggcggcttcggcgttccggaagagggacaggtggttccacctc
ccgctacacgacccgccgccgccgcccgaggcggccgaccgcctggagccgctggccccc
ggggagccgctcgtggtggacgtcctgctgtcccctgccggcgttggagcgggagcggga
gcgggaggggaggtggtggagaggtggactgtggcgtgcgagccctggccggacgccgcg
ggcggcgaggaggtggccgtgaaccgggcgtacaagcactgcttcacgctgctcaggtcg
gtgtacgccgtgctccgcgtcctcccggcgtaccgcgtcttccgcctcctctgcgccaac
cactcctacaactacgagatggttcaccacgtcgacaccttcgccgagccgttctcgcgc
ccccaggaggccgccatgcgctcccaccgcttcatccccgtcgagacccagctcggccgc
ctcgtcgtctccgtccagtacctccccagccttgcctccttcaacctggagatcacctcc
ctttcgccctccaggataatccctgactacgtcggcagcccagccgccgagcccatgcgc
gccttcccggcctcgcttaccgaagccacgggctccgccttcccaccgtcctatcagctg
cagcgcccgcacagctgggctccgcctgtgttctggccgtacacgccggcacagcaggtg
ttttacgcctcgcccacgccctcgccgcctcattttccaggtgggtacctgcagaagcgt
ctcactaggggggaatcagcgccaatgccaataccgcagctggttgagaggaggagccct
gtgcaccgccagaacacgctgccaccgccatctccgagaagaggagacatgggggcagca
ggtgctcaagagtctccatcagagatgggccggttgattgggagattgtcacccagacat
aagggcaaggacaacaaagatgaatctggcaggttctctgcactctcctcatgtgattcc
cctcggcaagacgatctggatgattatccttttttcgtggatgatgttgatcccccagtc
tcccaacctgggagcagtgatgggaaggaaacaagtgatcaggcaggttcgtcgtcccat
aaatctcaagatgcacaagtcggttctctagtctacctgctgaggaacgcgcgtccactg
cgagatcctagctattcattacaaacatcaagggctgagtccagcgaagcagcctcagca
agctccaccacgtcccgtaggacatctgacgcacttgaggagctccagtccttcaaagag
ataagggagcgactgcagtcccggagcagcgcaaaacatcaagagccaccagggaaacca
tag
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integrated database retrieval system
