Panicum hallii (Hall's panicgrass): 112899787
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Entry
112899787 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112899787
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112899787
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112899787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
Ariadne
UBA_ARI1
zf-C3HC4_2
Zn_ribbon_RanBP
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112899787
NCBI-ProteinID:
XP_025824179
LinkDB
All DBs
Position
7:38346772..38355018
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AA seq
589 aa
AA seq
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MDSEDDMHDANDSADDDFYSGGEAGLAGSDDGDADYDFADHDSDDSGELLSHRQQQNYSI
LSEVDIKQRQEDDINRVSTVLSISKSEACVLLRNYNWSVSKVHDEWFADEERVRKIIGLP
EKHMELPNDREVTCGICFESCPRGTMSAAACGHPFCSTCWRGYISTAINDGPGCLMLRCP
DPSCAAAVGQDMINALADDEDKEKYGRYLRRSYIEDNRKTKWCPAPGCEYAVEFVMGSGS
YDVNCNCSYGFCWNCTEEAHRPVDCATVSKWILKNSAESENMNWILANSKPCPKCKRPIE
KNQGCMHITCTPPCKFEFCWLCLGPWSEHGERTGGFYACNRYESARQEGAYDESERRREM
AKNSLERYTHYYERWAANQSSRQKALGDLQSLQNDKLEKLSDIQSQPESQLKFIIEAWLQ
IVECRRVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYLEAESP
SKDFNDFRTKLAGLTSVTRNYFENLVRALETGLNDVGPSTSHGTCSKSATSKSLGGKSKS
GKNRASSTSSKSGGSNRGLDDSNIWTCDQCTYANPKSARACQACDRQHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaggacgacatgcacgacgcgaacgactctgccgacgacgacttctacagc
ggcggggaggccgggctcgccggcagcgacgatggggacgccgactacgacttcgccgac
cacgactccgacgactccggggagctcctctcccaccggcagcagcaaaattacagcata
ctcagtgaagttgatatcaagcagcgccaagaagatgacataaatagagtttcaactgtt
ctttcaatttctaagtcagaagcatgtgttcttcttcgcaactataactggagtgttagt
aaggtgcatgacgaatggtttgccgatgaagagcgtgttcgtaagattattggcttacca
gagaagcacatggaactgccaaatgacagagaagtgacatgtggaatatgttttgaaagt
tgccctcgtggcacgatgagtgctgctgcttgtggtcatcctttctgcagtacatgttgg
agaggttacattagcactgctataaatgatggtccagggtgtttgatgttgaggtgtcct
gatccatcctgtgctgctgctgttggacaagatatgataaatgcactggctgatgatgag
gataaggaaaagtatgggagatatcttcgcagatcttacattgaagataacagaaagaca
aaatggtgtcctgctcctggatgtgaatatgcagtggaattcgtcatgggcagtggcagc
tacgatgtcaattgtaactgttcatatgggttttgttggaactgcactgaggaagctcat
cgtccagtagactgcgcaactgtttcaaagtggatcctcaagaacagtgcggaatctgag
aatatgaactggatactggctaattcaaagccttgtcctaaatgcaagcgacctattgag
aaaaatcagggatgcatgcacatcacatgcactcctccatgcaaatttgaattctgctgg
ctgtgtcttggtccatggtcggagcatggagagaggactggtggattttatgcttgtaac
cgctatgaatcagcaaggcaagaaggagcgtatgatgaatctgaaaggagaagagaaatg
gcaaagaactcccttgagagatatacacattattatgaacgatgggcagccaatcaatcg
tcaaggcaaaaggcgttgggagatcttcaaagtctgcagaatgacaagcttgaaaagtta
agtgacatacaaagccaacctgagtcacagctgaagttcatcatagaggcatggttacag
attgtcgaatgtagaagggtattgaagtggacttatgcctatggattttatctgccagag
cacgagcatgccaaaagacaattctttgaatatctgcaaggcgaggcagaatcgggtttg
gagcggttgcatcaatgcgcagagaaagaacttcaagtataccttgaagctgaatctccc
tcgaaagatttcaatgatttccgtacaaagctggctggattaactagcgtgactcgcaat
tattttgaaaatcttgtccgggctttggaaactggattaaatgatgtaggtccttccact
agccatggcacatgcagcaaaagtgcaacttccaagagtcttggtggtaaaagtaagagt
ggcaagaacagggcgtcaagcaccagctccaaatctggtggctcaaacagaggtttggat
gacagcaacatttggacatgcgatcagtgcacatatgcaaaccccaaatctgccagagcc
tgccaggcctgtgatcgccaacatcgatag
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