Panicum hallii (Hall's panicgrass): 112899898
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Entry
112899898 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112899898 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112899898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112899898
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112899898
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112899898
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
112899898
NCBI-ProteinID:
XP_025824334
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Position
7:1151241..1159451
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AA seq
502 aa
AA seq
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MLSRKQAVTIRNPPAPRPRLRLPQAGAGPMAASSCSCSYEEDTSGGEPSVNKPLAPARQE
SDDSEEEEESESDEAPPEPRTQPKEMSVFRLRIKKGLLNCTYCRRPLRPDTYNGRAYTCR
QCVRRQIYCRECIRCHHFLAADTHSACNLLNHIIAQMKFKCDCNKYIPYCEFVEHRRECP
SAKYSTPPARWKCMLKASVLRCSECEVPIRPPVFFSRSSNNLICSACYRADISTYRHCTE
LEYLLQGIKVKCIPCKQYFPFSWLGSRRVGDCPFKRELQNIAPGSSGRKKLCDEEENERP
MAGNNSIHGKNKRKVHFEVGKMDKHIFHGDEVASDDDSYDASYDDNHPESVKRVAENAFK
TPSCDKKAKTATPYGQKTDEYESTRPPAGNNSTIIGNTKGKARSKVRKMDNHIVDSDVVE
SDDDLSDDIHPESGIRVAENAFKTPACNKKVNIAMPYGQKTAPTHHGASRRQHLPITAPS
KPPLPRRPGTRLFESARNRNRG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccaggaagcaagcagtcaccatccgaaacccgccggcgccacgccctcgtctt
cgccttccccaagccggcgccggccccatggcggcctcctcctgctcctgctcctatgag
gaagacacctccggcggcgaaccctccgtcaataaacccctggcgccggcgcgtcaagaa
agcgacgacagcgaggaggaggaagaatccgaatccgatgaggcgccgccggagccacgg
acccagcccaaggagatgagtgtgtttaggctcaggattaaaaaggggctactgaactgc
acatattgccgccgacccctccggcctgacacttacaatggcagagcgtacacgtgccgc
cagtgcgtccgccgtcaaatctattgtcgtgaatgtatccgctgccaccattttctggct
gctgatactcactccgcctgcaatttgctgaaccacatcatcgctcagatgaagttcaaa
tgcgactgcaacaaatacattccttactgcgagtttgtggaacaccgccgtgagtgcccc
tctgccaaatattccactcctcctgcccggtggaagtgcatgctgaaggcaagtgtcctt
cggtgttctgaatgcgaggttcctatccggcctcccgttttcttctcgcgttcgagtaac
aatctcatttgtagcgcctgctaccgtgctgatatcagcacctaccgtcactgtactgag
cttgagtacctcctccaaggtataaaggtcaaatgcattccctgcaaacaatactttcca
ttctcctggttggggtcgcgccgggtgggcgattgcccattcaagcgtgaattgcaaaac
atcgccccaggctcgagtggccgaaaaaagttgtgtgatgaagaggaaaacgagagacct
atggcgggcaacaatagtatccatgggaaaaacaagcgaaaggttcattttgaggttggt
aaaatggacaagcacatttttcacggtgatgaggttgcgagtgatgatgactcatatgat
gcttcatatgatgacaaccatcctgagagtgtcaaaagagtggctgagaacgcttttaag
acaccttcttgtgataagaaagcaaagactgcaacgccatatgggcagaaaacagatgaa
tatgaaagcaccaggcctccagcgggcaacaacagtactatcattgggaataccaaggga
aaggctcgttccaaggttcgtaaaatggacaatcatattgttgacagtgatgtggttgag
agtgatgatgacttatctgatgacatccatcctgagagtggcattagagtggctgaaaac
gcttttaagacgcctgcatgtaataagaaagtaaatattgcaatgccatatgggcagaaa
acagcacctacccatcacggcgcgtcaagacggcagcacctacccatcacggcgccctcg
aagccacctctacctcgtcgcccaggcacccgtctcttcgaatcagcccgcaacaggaat
aggggttag
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