Panicum hallii (Hall's panicgrass): 112899976
Help
Entry
112899976 CDS
T07366
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112899976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112899976
03036 Chromosome and associated proteins [BR:
phai03036
]
112899976
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112899976
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112899976
PBAF complex
112899976
GBAF(ncBAF) complex
112899976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SURF2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
CCDC138_C
Motif
Other DBs
NCBI-GeneID:
112899976
NCBI-ProteinID:
XP_025824446
LinkDB
All DBs
Position
7:37801614..37809765
Genome browser
AA seq
794 aa
AA seq
DB search
MSPPAAGAAATSSDGPPSSPRELYTIPASSGWFRWDGIHETERRALPEFFGGAGGSGFGT
ATRNPRIYREYRDFIIAKYREDPARRLTFTEVRRALVGDVTLLRKVFAFLDASGLINFSA
SSSSSGPASRQQEVGVVVEAPVGLQVTPRPPASYFAEEKRGGPGGEKENGFRLPPLTSYG
DVFGEWAPGKAPICGFCGEECNDEKVETLKDGFKVCSKCSKSNNDNKEEANKCPGDKKES
VDNHASSPWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTI
NVKSVSRLHMNQATDGKMNQHLTKDSSSNSTEKVDGMQIDGNEDSADKSVEEHPTKRRRL
FSSMDATTSLMEQLALLTTSTSPDVVAAAADAAIKALGNENSQARKAFRLSEREFKTKAF
ASNHVQQIDRKVGNKDVEMHGQTGSDKKQEKKFIASAYQVRAAVATAIGVAAARAKMLAD
QEEREMELLMASIIETQLRKMQYKIKHFEELESVMEQEYTSMQQMQGSLMNEWLKALEQA
FRAGVSLPRDELLIKLFLNKETGHELPEREKESYARSRACRLALIDHAVARKKPPLNAFK
PHPEHKSKLVCNITGDTVNKSEEHIWKHINGKRFLNKLEKLEEQMASGEMVNGEAAKSKE
MEKKSKSRKKDKKDKKGKKKTNVDSPSMPREPKPEMDDSDDPDFWVPPVGSRWDDDDGKD
RWESSLGKNDSAKNEGGSDDDGGGDNDDGNDDDMSDKDDSESRELASSRTKRMSLEAVGP
SSFASRKKKPKKEQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccggcggccggcgctgccgccacctccagcgacgggccgccatcgtcgccg
cgcgagctctacaccatcccggcctcatccggttggttccggtgggacgggatccacgag
acggagcgccgcgcgctgccggagttcttcggcggggccggcggctccgggttcgggacg
gcgacacggaacccgcggatctaccgcgagtatcgcgacttcatcatcgccaagtaccgg
gaggacccggcgcgccggctcaccttcaccgaggtccgcagggcgctcgtcggggacgtc
acgctcctccggaaggtcttcgccttcctcgacgcctccggcctcatcaacttctcggcc
tcctcctcgtcctcgggccccgcatcgcggcagcaggaggtgggggtcgtcgtggaggcg
cccgtggggctgcaggtgacgccgcggccgccggcatcctacttcgccgaggagaagcgg
ggagggccgggcggggagaaggagaacgggttccgcttgcccccgctgacctcctacggc
gacgtgtttggcgaatgggcgcctgggaaggcccctatatgtgggttttgcggcgaggag
tgcaatgatgaaaaggttgagacgttgaaggatggttttaaagtatgttcaaagtgttcc
aaaagcaataatgataacaaggaagaagcgaataaatgtcctggtgacaaaaaggagagc
gtggacaaccatgcttctagtccatggacagacgcagagacgttacttcttttagaagga
gtcctaaaacatggagatgactgggatcttatcgcccagcatgtccgcacaaagaataaa
tcagaatgcatagcaaggcttattcagttgccatttggtgaacatatgctgggcacaata
aatgttaaatctgttagccggctccacatgaaccaggcaactgatggaaaaatgaaccag
caccttacgaaggactcttcaagcaattcaactgaaaaggttgatggcatgcagattgat
ggaaatgaagatagtgctgataaatcagtagaagaacatcctacaaaacgcagacggtta
ttttcttcaatggatgctacaacttcattaatggagcagttagcactcctgaccacatca
acgagcccagatgttgttgctgcagctgctgatgctgcaattaaagctttgggcaatgaa
aattcccaagcaaggaaagcctttcgccttagtgagcgagaatttaagactaaggcattt
gcttcaaaccatgtccaacagatcgatcgcaaagttggcaataaggatgtggaaatgcat
ggccagactggttctgataagaagcaggaaaagaagttcattgctagtgcatatcaagtg
agggcagctgttgctactgctattggtgtagctgctgcccgtgctaaaatgcttgcagac
caggaggagcgagaaatggagctcctaatggcatcaataattgaaactcagctaagaaag
atgcaatacaagatcaaacactttgaggagctagagtcggtcatggagcaggagtacacc
agtatgcagcaaatgcagggatccctcatgaatgaatggttaaaggccctggaacaagca
ttccgggctggagtgtcactgccgagagatgaattgctcataaagctgttcctgaacaag
gagacggggcacgagctgccggagcgggagaaggagtcctacgcgcggtcccgcgcctgc
cgtctcgcgctcatcgaccacgccgtcgcgcgcaagaagccgccgctcaacgccttcaag
ccccatcccgagcataagtcgaagctggtatgcaacattacaggggatacagttaacaag
tcggaggagcatatatggaagcacatcaacgggaagagatttcttaacaagctagaaaag
ctagaagaacagatggcttctggtgagatggttaatggagaagctgccaagtcaaaggaa
atggaaaagaagagcaagtcaagaaagaaggacaagaaggacaagaaaggcaagaagaaa
actaatgttgacagtccttctatgccacgagaacctaaaccagagatggatgattcggat
gatccagatttttgggtgcctcctgtcggaagtcgctgggatgatgatgacgggaaagac
agatgggagtcctcactggggaagaatgactcagcaaagaatgaaggtggttctgatgat
gatggcggtggtgataatgacgatggcaatgatgatgatatgtctgacaaggatgattct
gaatcaagggaacttgcttcgagcaggacaaagcgaatgtcactagaagcagttgggcca
agtagcttcgcttcaaggaagaaaaaacccaagaaggagcagtaa
DBGET
integrated database retrieval system
