Panicum hallii (Hall's panicgrass): 112899990
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Entry
112899990 CDS
T07366
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phai03012
]
112899990
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112899990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
PAM2
TPR_9
TPR_MalT
TPR_8
CLU
TPR_1
Motif
Other DBs
NCBI-GeneID:
112899990
NCBI-ProteinID:
XP_025824465
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All DBs
Position
7:45513695..45526343
Genome browser
AA seq
1721 aa
AA seq
DB search
MAPKAGRGKGRGGGGKGDKRKKEEKVVPSVVDVTVVTPYESQVTLKGISTDRVLDVRKLL
GSNVETCHLTNYSLSHVARGQRLEDGVEIVALKPCALRIVEEEYATEEQAVAHVRRLLDI
VACTTAFAKPRDGAAKHKSSKHGRPATPPSPPAPASTGANGGGSSGEGAPPISEAHDMAA
IRPPPKLGEFYDFFSFAHLTPPIHFIRRKEANGASQEGDYFEIEVKVCNGKLLHVVASVK
GFYLAGKPHNVSRSLVDLLQQLSNAFANAYEALMKAFVDHNKFGNLPYGFRANTWLIPPI
YVDPATKCPALPVEDENWGGDGGGTGRNGKYDRRRWSKDFSILARMPCKTEEERVIRDRK
AFLLHNLFVDTAIFRAASTIRRLIKQSMNSTGAQSDMHGSNIFEERIGDMHITVKKDGAD
ASLKLEDKVDGVAFCPTGAMDITQRNILKGLTSDENVVVKDSSMLGVVIAKHCGYTATVK
VSERAKDSNDVKQTYETSDNFDGVLNIDVHDHPDGGSNCLNVNSLRIPLPRIINPETTVG
NQYPNPKSHVSNPARKLACTVLEDSLRKLDSMPSKNSRIIRWELGSSWLQHLQKKDSPTS
EDGKGNKIKADKEPAVKGLGKHFEQLRKIKKKECNIEGSGSEKEESNSNCSPMNGMPESD
KIAVDETIKGADISKLMSEDAFFRLKSLGAGLHEKSLEELTEMAHNFYDDTALPKLVSDF
ASLELSPVDGRTMTDFMHTRGLNMSSLGRVVELAEKLPHIQSICIHEMVIRSFKHIIRAV
IAAVDDMQNMSAAIAETLNILLGSPRLENGADTDPHIEHNLRLKWVESFLSKRFSWKLKD
EFAHLRKFIILRGLCSKVGLELVARDYNMNSPNPFDKSDIISIVPVCKHVVYSSIDGRNL
LESSKVALDKGKLDDAVSYGTKALSKIIAVCGPYHRLTANAYSLLAVVLYHTGDFNQATI
YQQKALDINERELGLDHPETMKSYGDLSVFYYRLQHIEMALKYVNRALYLLQFSCGLSHP
NSAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSMMDA
YSLSVQHEQTTLQILQEKLGQDDLRTQDAAAWLEYFESKALEQQEAARRGMPKPDSSIAS
KGHLSVSDLLDFISPDQERKERDMQRKCRRAKNNIRAQHGESVEEKENFQHDSGSPLEAT
KDGFQEQKLDAHPPVVLEENYAAHDEQKQSDVLSPEEYSDEGWQAASLRGRSANVRKKSS
RRKPALTKLMVDRFEDGHTGSVYRSGFKPQTKGDKEDAASAPSQLSFGSFLKTDKLNGDT
NIVEEKSCNTTAKPERHAKPTGINRPTSIASKFVSYKDVAVSPPGTVLKPILKEEANEKE
NRHDADLTLSSEEEDRKFTEKEKEKPNDDSSKDVLLSQPDGISHQETPPDSNCDDSPSEL
KKASGSKLSASAPPFNPGSLLSMSHPYSTVAIYDASAVLQAIPSQPMEILPHAIDTRVPR
GPRSTLYYRTGHSFQRKQGYTHSQSTVVRGSYSPTTMNPHAAEFVPGKTVQQSDVADREP
SPANPVTDSDHDVVSQITDEVKAETSTAEKAGQDEKVVSGKGKENRGKDVVRNSYKSELA
RQILLSFIVKSVHDSLGSTAAVPDRKPSGSDETSNEQSSNISKNASGRQDSDKQQKAVEV
PKGLKDTEGFTVVSKRRRRPQPFMNPINGLYSQQSICTSVS
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaaggccggccgcggcaagggcaggggcggcggcggcaaaggcgacaagagg
aagaaggaggagaaagttgtgcccagcgtggtagacgtcacggtcgtcaccccctacgaa
tcccaggtgacactcaagggcatatccacggaccgtgtgctggacgtgcggaagctgctg
gggtcgaacgtggagacgtgtcacctgacaaactattcactctcccatgtggcgcgcggg
cagcggctggaggacggcgtggaaatcgtggcgctcaagccctgcgcgctccggatcgtg
gaagaggagtacgcgacggaggagcaggcggtggcgcacgtccgccggctgctggacatc
gtcgcctgcaccaccgcgttcgccaagccccgggacggcgcagccaagcacaagtcgtcc
aagcacggccgccccgcgacgccgccctccccgcccgcgcccgcctcgaccggggccaat
ggcggcggcagcagtggcgagggcgcgccgccgatatcggaggcgcacgacatggcggcc
atccgcccgccgccgaagctgggggagttctacgacttcttctccttcgcccacctcacc
ccgcccatccactttatcaggaggaaggaggcgaatggcgcttctcaggaaggcgattac
ttcgaaatcgaggtgaaggtttgcaacgggaagcttctgcatgtagttgcttcagtaaag
ggtttctacttggcagggaagccgcacaatgtaagccgctccctggtggacctactgcag
cagctcagcaatgcgtttgcaaatgcatatgaggcattgatgaaagcttttgtggatcac
aacaagtttgggaatttgccgtatggattccgtgcaaacacatggcttattcctccaata
tatgttgaccctgctacaaagtgtccagcactgccagtcgaggatgagaattggggtggt
gatgggggtggcactggacgcaacggaaaatatgaccgcagacggtggtcaaaagatttt
tctattttggctagaatgccatgcaaaactgaggaagagcgggtgatccgggacaggaaa
gcttttcttttacacaatctgtttgtagatacagcaatttttagagctgcatcaacaata
aggcgactcattaaacagtctatgaactcaactggtgcgcaaagtgatatgcatggttca
aacatatttgaggaacgtatcggagacatgcatataactgtgaagaaggatggggctgat
gctagtctgaagctggaggacaaggttgatggtgttgccttctgtccaacaggtgctatg
gatatcacacaaagaaatattctgaaaggtttgacttctgatgaaaatgttgttgttaag
gattcttcaatgctaggagtggtgattgccaagcattgtggatatacagcaactgtgaag
gtttctgaacgcgcaaaggatagtaatgatgttaaacaaacctatgaaacctctgataat
tttgatggagtgctgaacattgatgtgcatgaccatcccgatggaggttctaattgcttg
aatgttaacagtctaagaataccactcccgagaattatcaatccagaaaccactgttggt
aaccagtatccgaacccaaagtctcatgttagtaatcctgcacggaaactggcatgcaca
gtacttgaggacagcttgagaaagctggatagcatgcctagcaaaaattctagaattatc
agatgggaacttgggtcctcctggctgcagcacttgcagaaaaaggattctccaacgtcc
gaggatggtaagggaaacaaaataaaggctgacaaagaaccagctgtgaaaggtcttgga
aagcattttgaacaattaaggaaaataaaaaagaaagaatgcaacattgaaggttctggt
tctgagaaggaagaatctaacagtaattgctcaccaatgaatggtatgccagaatcagat
aagatagctgttgatgaaacgattaagggggctgatataagcaagctaatgtcagaggat
gctttctttcggttgaagagtttgggagctggccttcatgaaaagtcccttgaagaactc
acagagatggcccataatttctatgatgatactgcactcccaaagctggtgtctgatttt
gcgtcccttgaactttctccggtggatggaagaaccatgacagatttcatgcatacaagg
ggacttaacatgtcctccttgggtcgtgtggtagagctagcagagaagctcccacatatc
cagtctatatgcattcatgaaatggtcattaggtcgtttaaacacatcatcagagctgtt
attgctgctgttgatgacatgcaaaatatgtctgcagctatagctgagactctaaacata
ttactaggatcccccagacttgaaaatggtgctgatacagatccacatatcgagcataat
ttgcgattgaaatgggtagagagcttcctttcaaaaagattcagctggaaactgaaagat
gaatttgcacacctgcgaaaatttatcattctgagagggctttgcagcaaggttggacta
gagttggttgcaagagattataatatgaatagccctaacccattcgacaagtctgacatt
atcagcattgttcctgtatgcaagcatgtggtctactcctcaattgatggtcgaaacttg
ctggaatcatcgaaggtggcattggataaaggaaaactagatgatgctgtcagctatgga
acaaaggccttgtccaaaattatagctgtttgtggtccataccatcgtctgactgctaat
gcatacagccttcttgctgtcgtgctttatcatactggagattttaatcaggcaactata
tatcagcaaaaggcacttgatatcaatgaaagggaacttggtcttgatcatccggaaact
atgaagagttatggggatttatctgtcttctactaccgactgcaacacattgaaatggct
ctaaagtatgtcaaccgtgcactgtatctgcttcagttttcgtgtgggctttcacaccca
aattcagctgccacctacataaatgtggctatgatggaagaaggcatgggaaatgtccat
gttgctcttcggtacttgcatgaagccctgaagtgcaacaagagattgctaggagctgat
cacatccagactgctgcaagctaccatgccatagccatagccctttcgatgatggacgcg
tactccctaagtgtgcaacatgaacaaaccaccttgcagatccttcaggagaaactaggg
caagatgacctccgaactcaggatgctgctgcatggctagagtatttcgagtcaaaagca
ttagaacaacaagaggccgctcgaagaggaatgccaaaacctgattcatctattgcaagt
aaaggacatcttagcgtatcagatcttcttgacttcataagtccagaccaagaaagaaaa
gagagggatatgcaaaggaagtgcaggcgtgcaaagaataatatcagagcccaacatggt
gaatcagttgaagaaaaggagaacttccagcatgattcaggatctcctcttgaagcaacc
aaagatggatttcaagaacaaaaactggatgcgcatcctcctgtggtattagaagaaaat
tacgctgcccatgatgagcagaagcaatctgatgttttatcacctgaagaatattctgat
gaagggtggcaagcagctagtttgagagggagatctgcaaatgtaaggaagaaaagcagt
cgcaggaagccagctctcacgaaattaatggttgatcgcttcgaagatggtcatacaggt
tctgtttataggagtggtttcaagccgcaaacaaagggagacaaagaagatgctgcaagt
gctcctagccaactctcctttggtagctttttaaaaaccgacaagttgaatggggatacc
aacattgttgaagagaagtcttgcaatactacggctaaaccagaacggcatgcaaaaccc
acaggaattaacaggccaactagcattgcttccaagtttgtatcatacaaagatgtggct
gtttcgccccctggcacggtattgaagcccattttgaaggaggaagcaaatgagaaagaa
aatagacatgatgctgatctaacactgtcgtctgaggaagaggatagaaaatttacagaa
aaagagaaggaaaagccaaatgatgatagcagcaaagatgttcttttgagtcagccagac
ggaatcagtcaccaagaaacacctcctgacagcaactgcgatgatagcccctcagaactt
aagaaagcatctggaagcaaactgtctgcttcagcacccccattcaatccgggatcactt
ttatcaatgtcacacccatacagcacagtggcaatatatgatgctagtgctgtccttcag
gcaataccaagccaaccaatggagattctccctcatgccattgatactagagtgcctcgt
ggtcctcggtccaccttgtactatcgtactgggcattctttccaaaggaaacaaggttac
acacacagccagagcactgttgtaaggggtagctactcccccacgaccatgaatccccat
gctgctgagtttgtgcctggaaaaactgttcaacaatctgatgtggctgacagagaaccc
agtcctgctaatcctgtgactgattctgaccacgatgtggtttcacagatcacagatgaa
gtaaaggctgagacatccaccgcagaaaaggcaggtcaagatgagaaagtcgtttcaggt
aaaggaaaggaaaacagggggaaagacgtcgtaagaaattcgtacaaatcagaacttgca
aggcaaattttgctcagtttcattgtgaagtcagtgcatgatagtttaggttccactgct
gctgtaccagacagaaagcccagtggttcagatgaaactagtaatgaacagagcagcaac
atcagcaagaacgcatctggtcggcaagattctgataaacaacagaaagccgtggaggtg
cctaaaggtctgaaggatacagagggatttacagtggtttcaaaacgtcgaaggaggcca
cagccattcatgaaccccatcaatggtctctattctcagcagtctatttgcacttctgtc
agttaa
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integrated database retrieval system