KEGG   Panicum hallii (Hall's panicgrass): 112899990
Entry
112899990         CDS       T07366                                 
Name
(RefSeq) protein TSS-like isoform X1
  KO
K03255  protein TIF31
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:phai03012]
    112899990
Translation factors [BR:phai03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    112899990
SSDB
Motif
Pfam: TPR_12 eIF3_p135 TPR_10 TPR_NPHP3 CLU_N TPR_2 PAM2 TPR_9 TPR_MalT TPR_8 CLU TPR_1
Other DBs
NCBI-GeneID: 112899990
NCBI-ProteinID: XP_025824465
LinkDB
Position
7:45513695..45526343
AA seq 1721 aa
MAPKAGRGKGRGGGGKGDKRKKEEKVVPSVVDVTVVTPYESQVTLKGISTDRVLDVRKLL
GSNVETCHLTNYSLSHVARGQRLEDGVEIVALKPCALRIVEEEYATEEQAVAHVRRLLDI
VACTTAFAKPRDGAAKHKSSKHGRPATPPSPPAPASTGANGGGSSGEGAPPISEAHDMAA
IRPPPKLGEFYDFFSFAHLTPPIHFIRRKEANGASQEGDYFEIEVKVCNGKLLHVVASVK
GFYLAGKPHNVSRSLVDLLQQLSNAFANAYEALMKAFVDHNKFGNLPYGFRANTWLIPPI
YVDPATKCPALPVEDENWGGDGGGTGRNGKYDRRRWSKDFSILARMPCKTEEERVIRDRK
AFLLHNLFVDTAIFRAASTIRRLIKQSMNSTGAQSDMHGSNIFEERIGDMHITVKKDGAD
ASLKLEDKVDGVAFCPTGAMDITQRNILKGLTSDENVVVKDSSMLGVVIAKHCGYTATVK
VSERAKDSNDVKQTYETSDNFDGVLNIDVHDHPDGGSNCLNVNSLRIPLPRIINPETTVG
NQYPNPKSHVSNPARKLACTVLEDSLRKLDSMPSKNSRIIRWELGSSWLQHLQKKDSPTS
EDGKGNKIKADKEPAVKGLGKHFEQLRKIKKKECNIEGSGSEKEESNSNCSPMNGMPESD
KIAVDETIKGADISKLMSEDAFFRLKSLGAGLHEKSLEELTEMAHNFYDDTALPKLVSDF
ASLELSPVDGRTMTDFMHTRGLNMSSLGRVVELAEKLPHIQSICIHEMVIRSFKHIIRAV
IAAVDDMQNMSAAIAETLNILLGSPRLENGADTDPHIEHNLRLKWVESFLSKRFSWKLKD
EFAHLRKFIILRGLCSKVGLELVARDYNMNSPNPFDKSDIISIVPVCKHVVYSSIDGRNL
LESSKVALDKGKLDDAVSYGTKALSKIIAVCGPYHRLTANAYSLLAVVLYHTGDFNQATI
YQQKALDINERELGLDHPETMKSYGDLSVFYYRLQHIEMALKYVNRALYLLQFSCGLSHP
NSAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSMMDA
YSLSVQHEQTTLQILQEKLGQDDLRTQDAAAWLEYFESKALEQQEAARRGMPKPDSSIAS
KGHLSVSDLLDFISPDQERKERDMQRKCRRAKNNIRAQHGESVEEKENFQHDSGSPLEAT
KDGFQEQKLDAHPPVVLEENYAAHDEQKQSDVLSPEEYSDEGWQAASLRGRSANVRKKSS
RRKPALTKLMVDRFEDGHTGSVYRSGFKPQTKGDKEDAASAPSQLSFGSFLKTDKLNGDT
NIVEEKSCNTTAKPERHAKPTGINRPTSIASKFVSYKDVAVSPPGTVLKPILKEEANEKE
NRHDADLTLSSEEEDRKFTEKEKEKPNDDSSKDVLLSQPDGISHQETPPDSNCDDSPSEL
KKASGSKLSASAPPFNPGSLLSMSHPYSTVAIYDASAVLQAIPSQPMEILPHAIDTRVPR
GPRSTLYYRTGHSFQRKQGYTHSQSTVVRGSYSPTTMNPHAAEFVPGKTVQQSDVADREP
SPANPVTDSDHDVVSQITDEVKAETSTAEKAGQDEKVVSGKGKENRGKDVVRNSYKSELA
RQILLSFIVKSVHDSLGSTAAVPDRKPSGSDETSNEQSSNISKNASGRQDSDKQQKAVEV
PKGLKDTEGFTVVSKRRRRPQPFMNPINGLYSQQSICTSVS
NT seq 5166 nt   +upstreamnt  +downstreamnt
atggcccccaaggccggccgcggcaagggcaggggcggcggcggcaaaggcgacaagagg
aagaaggaggagaaagttgtgcccagcgtggtagacgtcacggtcgtcaccccctacgaa
tcccaggtgacactcaagggcatatccacggaccgtgtgctggacgtgcggaagctgctg
gggtcgaacgtggagacgtgtcacctgacaaactattcactctcccatgtggcgcgcggg
cagcggctggaggacggcgtggaaatcgtggcgctcaagccctgcgcgctccggatcgtg
gaagaggagtacgcgacggaggagcaggcggtggcgcacgtccgccggctgctggacatc
gtcgcctgcaccaccgcgttcgccaagccccgggacggcgcagccaagcacaagtcgtcc
aagcacggccgccccgcgacgccgccctccccgcccgcgcccgcctcgaccggggccaat
ggcggcggcagcagtggcgagggcgcgccgccgatatcggaggcgcacgacatggcggcc
atccgcccgccgccgaagctgggggagttctacgacttcttctccttcgcccacctcacc
ccgcccatccactttatcaggaggaaggaggcgaatggcgcttctcaggaaggcgattac
ttcgaaatcgaggtgaaggtttgcaacgggaagcttctgcatgtagttgcttcagtaaag
ggtttctacttggcagggaagccgcacaatgtaagccgctccctggtggacctactgcag
cagctcagcaatgcgtttgcaaatgcatatgaggcattgatgaaagcttttgtggatcac
aacaagtttgggaatttgccgtatggattccgtgcaaacacatggcttattcctccaata
tatgttgaccctgctacaaagtgtccagcactgccagtcgaggatgagaattggggtggt
gatgggggtggcactggacgcaacggaaaatatgaccgcagacggtggtcaaaagatttt
tctattttggctagaatgccatgcaaaactgaggaagagcgggtgatccgggacaggaaa
gcttttcttttacacaatctgtttgtagatacagcaatttttagagctgcatcaacaata
aggcgactcattaaacagtctatgaactcaactggtgcgcaaagtgatatgcatggttca
aacatatttgaggaacgtatcggagacatgcatataactgtgaagaaggatggggctgat
gctagtctgaagctggaggacaaggttgatggtgttgccttctgtccaacaggtgctatg
gatatcacacaaagaaatattctgaaaggtttgacttctgatgaaaatgttgttgttaag
gattcttcaatgctaggagtggtgattgccaagcattgtggatatacagcaactgtgaag
gtttctgaacgcgcaaaggatagtaatgatgttaaacaaacctatgaaacctctgataat
tttgatggagtgctgaacattgatgtgcatgaccatcccgatggaggttctaattgcttg
aatgttaacagtctaagaataccactcccgagaattatcaatccagaaaccactgttggt
aaccagtatccgaacccaaagtctcatgttagtaatcctgcacggaaactggcatgcaca
gtacttgaggacagcttgagaaagctggatagcatgcctagcaaaaattctagaattatc
agatgggaacttgggtcctcctggctgcagcacttgcagaaaaaggattctccaacgtcc
gaggatggtaagggaaacaaaataaaggctgacaaagaaccagctgtgaaaggtcttgga
aagcattttgaacaattaaggaaaataaaaaagaaagaatgcaacattgaaggttctggt
tctgagaaggaagaatctaacagtaattgctcaccaatgaatggtatgccagaatcagat
aagatagctgttgatgaaacgattaagggggctgatataagcaagctaatgtcagaggat
gctttctttcggttgaagagtttgggagctggccttcatgaaaagtcccttgaagaactc
acagagatggcccataatttctatgatgatactgcactcccaaagctggtgtctgatttt
gcgtcccttgaactttctccggtggatggaagaaccatgacagatttcatgcatacaagg
ggacttaacatgtcctccttgggtcgtgtggtagagctagcagagaagctcccacatatc
cagtctatatgcattcatgaaatggtcattaggtcgtttaaacacatcatcagagctgtt
attgctgctgttgatgacatgcaaaatatgtctgcagctatagctgagactctaaacata
ttactaggatcccccagacttgaaaatggtgctgatacagatccacatatcgagcataat
ttgcgattgaaatgggtagagagcttcctttcaaaaagattcagctggaaactgaaagat
gaatttgcacacctgcgaaaatttatcattctgagagggctttgcagcaaggttggacta
gagttggttgcaagagattataatatgaatagccctaacccattcgacaagtctgacatt
atcagcattgttcctgtatgcaagcatgtggtctactcctcaattgatggtcgaaacttg
ctggaatcatcgaaggtggcattggataaaggaaaactagatgatgctgtcagctatgga
acaaaggccttgtccaaaattatagctgtttgtggtccataccatcgtctgactgctaat
gcatacagccttcttgctgtcgtgctttatcatactggagattttaatcaggcaactata
tatcagcaaaaggcacttgatatcaatgaaagggaacttggtcttgatcatccggaaact
atgaagagttatggggatttatctgtcttctactaccgactgcaacacattgaaatggct
ctaaagtatgtcaaccgtgcactgtatctgcttcagttttcgtgtgggctttcacaccca
aattcagctgccacctacataaatgtggctatgatggaagaaggcatgggaaatgtccat
gttgctcttcggtacttgcatgaagccctgaagtgcaacaagagattgctaggagctgat
cacatccagactgctgcaagctaccatgccatagccatagccctttcgatgatggacgcg
tactccctaagtgtgcaacatgaacaaaccaccttgcagatccttcaggagaaactaggg
caagatgacctccgaactcaggatgctgctgcatggctagagtatttcgagtcaaaagca
ttagaacaacaagaggccgctcgaagaggaatgccaaaacctgattcatctattgcaagt
aaaggacatcttagcgtatcagatcttcttgacttcataagtccagaccaagaaagaaaa
gagagggatatgcaaaggaagtgcaggcgtgcaaagaataatatcagagcccaacatggt
gaatcagttgaagaaaaggagaacttccagcatgattcaggatctcctcttgaagcaacc
aaagatggatttcaagaacaaaaactggatgcgcatcctcctgtggtattagaagaaaat
tacgctgcccatgatgagcagaagcaatctgatgttttatcacctgaagaatattctgat
gaagggtggcaagcagctagtttgagagggagatctgcaaatgtaaggaagaaaagcagt
cgcaggaagccagctctcacgaaattaatggttgatcgcttcgaagatggtcatacaggt
tctgtttataggagtggtttcaagccgcaaacaaagggagacaaagaagatgctgcaagt
gctcctagccaactctcctttggtagctttttaaaaaccgacaagttgaatggggatacc
aacattgttgaagagaagtcttgcaatactacggctaaaccagaacggcatgcaaaaccc
acaggaattaacaggccaactagcattgcttccaagtttgtatcatacaaagatgtggct
gtttcgccccctggcacggtattgaagcccattttgaaggaggaagcaaatgagaaagaa
aatagacatgatgctgatctaacactgtcgtctgaggaagaggatagaaaatttacagaa
aaagagaaggaaaagccaaatgatgatagcagcaaagatgttcttttgagtcagccagac
ggaatcagtcaccaagaaacacctcctgacagcaactgcgatgatagcccctcagaactt
aagaaagcatctggaagcaaactgtctgcttcagcacccccattcaatccgggatcactt
ttatcaatgtcacacccatacagcacagtggcaatatatgatgctagtgctgtccttcag
gcaataccaagccaaccaatggagattctccctcatgccattgatactagagtgcctcgt
ggtcctcggtccaccttgtactatcgtactgggcattctttccaaaggaaacaaggttac
acacacagccagagcactgttgtaaggggtagctactcccccacgaccatgaatccccat
gctgctgagtttgtgcctggaaaaactgttcaacaatctgatgtggctgacagagaaccc
agtcctgctaatcctgtgactgattctgaccacgatgtggtttcacagatcacagatgaa
gtaaaggctgagacatccaccgcagaaaaggcaggtcaagatgagaaagtcgtttcaggt
aaaggaaaggaaaacagggggaaagacgtcgtaagaaattcgtacaaatcagaacttgca
aggcaaattttgctcagtttcattgtgaagtcagtgcatgatagtttaggttccactgct
gctgtaccagacagaaagcccagtggttcagatgaaactagtaatgaacagagcagcaac
atcagcaagaacgcatctggtcggcaagattctgataaacaacagaaagccgtggaggtg
cctaaaggtctgaaggatacagagggatttacagtggtttcaaaacgtcgaaggaggcca
cagccattcatgaaccccatcaatggtctctattctcagcagtctatttgcacttctgtc
agttaa

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