Panicum hallii (Hall's panicgrass): 112900137
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Entry
112900137 CDS
T07366
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112900137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112900137
04121 Ubiquitin system [BR:
phai04121
]
112900137
03029 Mitochondrial biogenesis [BR:
phai03029
]
112900137
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
112900137
Ubiquitin system [BR:
phai04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
112900137
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112900137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
112900137
NCBI-ProteinID:
XP_025824680
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Position
7:complement(38598187..38599995)
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AA seq
229 aa
AA seq
DB search
MGGSPAGDGTLSLDGFNASAAALVKRWKEIEVDDSLPDWTWKPCSKMGVPSEVEGYLALE
GVYRDCGGSQEQIDENDNSDGADVVACDTWHSLCPFPLQVQSCSDNVHVYDFHVVYSYSY
KVPVLYFQGHRSDGQLLTLDEIKQHLPSNSLKVLGESKWTFITREEHPHLSRPWFTLHPC
ATSDWMKLLLEQSKVAIEEQSLLRYLSAWLSVVGQAVGLKIALELHCNS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctcccctgctggggatgggaccctgtccctggacggcttcaacgcctccgcg
gcggcgctggtgaagaggtggaaggagatcgaggtcgacgactccctccctgactggaca
tggaagccctgcagcaaaatgggtgtgccgtcagaggtagaggggtatctggcgttggaa
ggagtgtaccgcgactgtggagggagccaggagcagattgacgagaacgacaattctgat
ggtgcagacgttgttgcgtgtgatacttggcattcgttgtgtcctttccctttgcaggtc
cagagctgtagtgataatgtccatgtttatgatttccatgttgtctacagctactcttac
aaggttccggtgctatactttcagggtcatcgttctgatggacagctgctaacgctggat
gagataaaacaacaccttccttctaactcgcttaaagtattaggcgagtcgaagtggacg
tttattactcgggaggagcacccccacttaagcaggccatggttcaccttgcacccctgt
gcaaccagtgactggatgaagctacttcttgaacaaagtaaagtggcaattgaggaacaa
tcgctgctgcgatatctatcggcatggctatccgtggttggccaggcagtaggacttaaa
atcgctcttgagcttcattgcaactcatag
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integrated database retrieval system
