Panicum hallii (Hall's panicgrass): 112900203
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Entry
112900203 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112900203
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112900203
04121 Ubiquitin system [BR:
phai04121
]
112900203
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112900203
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112900203
Membrane trafficking [BR:
phai04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112900203
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112900203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
112900203
NCBI-ProteinID:
XP_025824765
LinkDB
All DBs
Position
7:35078059..35082059
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AA seq
527 aa
AA seq
DB search
MGKFICDNPIVSPSEVNRHHYSLAAVAVGLGLGVAGLCKAFYSGLSIPWVSPRNLFLGSG
RVYYVGGLQNLGNNCFLNVILQALASCDSFVSFLDNLLATDGLLPEEKAERMPLLLALSS
LLQDLSVVRDERIVLNPHGVMHALSFYVSHFNLTRQQDASEAFLHLLISLRDEFSHCYVP
HRSSLADITLSHSKVYKQREGNQPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFQN
FQCLPLSPVLNTNGDITSGCSLVDCLKYFTVVEHLDNYHCDRCWHITAAKYLSLKSEADE
EKVSKLNTCVDYGTCSCRGMFSPEGIPCSSSSRATKQLIISQCPKILCIHFLRASVSLDG
EPIKHQGHISFPLLLNLSPFAGGASSIGQESGPLAMNVQRDGQQALHLYRQLNMQMSLNV
IPTGGNSIHVANVDVASSSSSSLQPSPSSSRSKLCGLSAVVEHYGKCGGGHYAVYRRVAS
NPDPEVPGQTLAGLGKRWFYISDGHVSEVSEDDVLGAEATLLFYERL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtttatatgtgacaatccaattgtatctcctagtgaagtaaatagacatcac
tatagtcttgcagccgttgctgtcggcttgggactaggagttgctgggttatgcaaggca
ttttatagtggtttgtccataccatgggtctctccgaggaatttatttttgggatcagga
agagtatactatgttggaggtctacaaaatcttggcaacaattgctttcttaatgtcatc
ctgcaggcacttgccagctgtgatagttttgtttcctttctagataatttgcttgcaact
gatggcttgctacctgaagaaaaggctgaaagaatgcctcttcttcttgctctaagttct
ctcttgcaagacttgagcgtagttcgagatgaaagaattgtgttgaatccacatggagta
atgcatgctttgagtttctatgttagtcacttcaatttgaccagacagcaggatgcttcg
gaagcttttcttcatcttctgatctcactgcgggatgaattttcccattgttatgtacca
cataggagttctctggcagacatcaccctatctcactctaaagtatacaagcaaagggaa
ggtaaccagcctgaatgcaagcgctggaaacaaaatctatttggccccttcgatgggaca
attggcagcatattgtcttgcagaaactgttcatctgtgctatcgttggacttccagaat
ttccaatgcctgcctctctcaccagtgcttaatacaaatggagatattaccagtgggtgt
agtttggtggattgcctaaagtacttcactgtggtggaacatcttgacaattatcattgt
gatcggtgttggcatattactgctgccaagtatctttctctcaaatcagaagctgatgag
gaaaaagttagcaaacttaacacctgtgtcgactatggcacttgcagttgcaggggcatg
ttttccccagagggaataccttgttcatcatcttcacgagcaacaaagcagttgattatc
agtcagtgtccgaagattttgtgcattcattttctacgtgcttcagttagtcttgatggt
gagcccatcaaacatcagggacatatttcttttcctttacttctcaatctatccccattt
gcgggaggtgcatcaagcattgggcaggagtctggacctttggcaatgaacgtgcaaaga
gatggccagcaagctctccatctataccgacaactgaatatgcagatgagcttgaatgta
atacctactggagggaactcgattcacgtggcaaatgttgatgtggctagtagttcatca
tcatcactgcagccgtcaccatcatcatcaaggagcaagttatgtggtctttcagccgtt
gtggaacactacgggaaatgcggaggagggcactatgcagtttacaggagagttgcatca
aatcctgatcctgaggttccagggcaaactcttgcaggtcttggcaagcggtggttttac
atttcagatggtcacgtatcagaagtttcagaggatgatgttttgggtgcggaggccacc
cttcttttctatgaaagattgtag
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