KEGG   Panicum hallii (Hall's panicgrass): 112900255
Entry
112900255         CDS       T07366                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112900255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112900255
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112900255
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112900255
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 112900255
NCBI-ProteinID: XP_025824831
LinkDB
Position
7:complement(40284595..40288392)
AA seq 260 aa
MEAGRMDQPCMAAINSQPLVADVEAVKKASGDMPAPMGSGCFDCNICLDFAAEPVVTLCG
HLYCWPCIYEWLRPGVESTASDNSSSARRQCPVCKATLSPDTLVPLYGRGGNSKKSLNGV
AIPRRPMVHRETVEHHNTQSNVDDQHHHQSMETNPPHQPLRHAHYHPSPTGFDFIYPPAP
LGRGLIHSTAGGVLGGMAEAVLPLVLRGQLPASLYYTSPYHVAAQNVNPRLRRHQMEIER
SLHQIWFFLFVFVVLCLLLF
NT seq 783 nt   +upstreamnt  +downstreamnt
atggaagctgggagaatggatcagccttgcatggctgctatcaatagccagcctttggtg
gctgatgttgaggcagtgaagaaagccagtggggacatgcctgcaccaatgggaagtgga
tgcttcgactgcaacatctgccttgattttgcagcagaacctgtggttaccctctgtggt
cacctttactgctggccttgtatctatgagtggctgcgccctggggtggaatcaactgcc
agtgacaacagcagttcagcaaggcggcagtgccccgtatgtaaggcaacactctccccg
gatacactagtgccactatatggccgtggagggaactcaaagaaatcactgaatggcgtg
gccattccgcgccgtcccatggtgcaccgggagactgttgagcatcataacacacagagc
aacgtcgatgaccagcaccaccaccagagcatggaaaccaaccctccgcaccagccattg
cggcacgcacactaccatcccagtcccactgggtttgacttcatctaccctcccgcacca
ctaggacgtggcttgatccactcaactgccggaggggtgcttggagggatggcagaggct
gtcctcccgttggtgctccgtggccagctgccagcaagcttgtactatacaagcccttac
catgtcgcggcacagaacgtgaaccccaggctgaggcggcatcagatggagattgagcgg
tccctgcaccagatctggttcttcctgtttgtgtttgtggtgctgtgcttgctcttgttc
tga

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