Panicum hallii (Hall's panicgrass): 112900454
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Entry
112900454 CDS
T07366
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112900454
03021 Transcription machinery [BR:
phai03021
]
112900454
Transcription factors [BR:
phai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112900454
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112900454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
HI0933_like
KRAB
Motif
Other DBs
NCBI-GeneID:
112900454
NCBI-ProteinID:
XP_025825107
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All DBs
Position
1:9303689..9306130
Genome browser
AA seq
491 aa
AA seq
DB search
MATVAAGGSKRGGGRGRKALVAVLDNEANISAGKAAKAGDLSASSAQKAKRASSKSGKAA
KAAAAAAASAVVDDVAELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEIETKEKEQERL
QAELRKVQRAKEFKPTVSFPLVKSLLEKEQDGDDKGKKKKGKGKAGLERKKPCPAYVLWM
KDQWVEIKKENPEADFKEVSNTLGAKWKALGAEEKQPYEERYRLEKEAYLQVVGQEKREA
EAMKLLEEQQMQWTAKELLEQYLKFRQEAEEGDGKKGQRKNRKKDKDPSKPKQPMSAYFV
YSQERRAALVEEKKNVPEIGKITGEEWKNMTEAQKSPYEEVAKKQKEEYHRQMEVYKQKK
IEEAASLEKEEEEQKKIMKQEALQLLKKKEKADNIIKKTKEKRQKKKQENADPNRPRKPA
SSFILFSKEARKQLLEERPGINNSTLNALISVKWKELSGEERQMWNDKAAPAMAAYKKEM
EEYTKAHSSSA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtcgcggcgggagggagcaagaggggcggcggccggggccgcaaggcgctc
gtggccgtgctcgacaacgaggccaacatctccgccgggaaggccgccaaggccggggac
ctctcggcctcctccgcgcagaaggcgaagcgggcgtcgtccaagagcggcaaggctgcc
aaggccgcggccgcggcggcggcgtcggccgtcgtggacgacgtggcggagctccagggg
atgctggagcggctgcggctggagaaggagaaggcggaggagatggtgcgggagcgggac
gaggtcatccggaagaaggaggaggagatcgagaccaaggagaaggagcaggagcgcctc
caggccgagctcaggaaggtgcagcgcgccaaggagttcaagcccaccgtgagctttcct
ctcgtcaagtcgctgcttgagaaggagcaggacggagacgacaagggcaagaagaagaag
gggaagggcaaggccggcctggagaggaagaagccctgccctgcctatgttctttggatg
aaggaccaatgggtcgagatcaagaaggagaacccggaggccgacttcaaggaggtgtcc
aacacgctgggcgccaagtggaaggcgctgggcgccgaggagaagcagccctacgaggag
cggtaccggctggagaaggaggcctacctgcaggtggtcggccaggagaagcgcgaggcc
gaggccatgaagctgctcgaggagcagcagatgcagtggaccgccaaggagctgctggag
cagtacctcaagttcaggcaggaggccgaggagggcgacggcaagaaggggcagaggaag
aacagaaagaaggacaaggacccctccaagcccaagcagcccatgtcggcctactttgtg
tactcgcaggagaggcgcgccgcgctggtcgaggagaagaagaacgtgcctgagatcggc
aagatcaccggagaggagtggaagaacatgacagaggctcagaagtctccctacgaggaa
gtcgcgaagaagcagaaggaggagtaccacaggcagatggaggtgtacaagcagaagaag
attgaggaagctgcgagcctggagaaagaagaagaggagcagaagaaaatcatgaagcaa
gaggctctccagctgcttaagaaaaaggagaaggcagacaacatcatcaagaaaaccaaa
gaaaagcgccagaagaagaagcaggagaacgctgatcccaacaggcccaggaagcctgcc
tcttccttcattcttttcagcaaggaagcgaggaagcagctgctcgaggagcgccctggc
atcaataactcaacactgaacgcgctcatctcggtgaagtggaaggagctgagcggcgag
gagcggcagatgtggaatgataaggccgcgcctgccatggcggcatacaagaaggagatg
gaggagtacaccaaggctcacagctcatccgcttga
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integrated database retrieval system
