Panicum hallii (Hall's panicgrass): 112900467
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Entry
112900467 CDS
T07366
Name
(RefSeq) protein argonaute 1B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112900467
03036 Chromosome and associated proteins [BR:
phai03036
]
112900467
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112900467
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112900467
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112900467
microRNA pathway
RISC loading complex
112900467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112900467
NCBI-ProteinID:
XP_025825115
LinkDB
All DBs
Position
7:complement(41854727..41869504)
Genome browser
AA seq
1097 aa
AA seq
DB search
MICDLDMAMRVENGRPYQVPIMVRKKRTGPGGSGETSGESSGASGQGSSQRPERTQQHGG
GRGWVPQQGGRGGGQHQGRGGHYQGRGGPGPHHPGGGPPEYHPRDYQGRGGEYQGRGGDY
QGRGGPRPRGGMPQPYYGGHRGGIVGRNVPPGPSRTVPELHQAPYVQYQAPMVSPSPSGP
GSSSQPMAEGSSGHVQQQFQQLAIRGQTSTSQEIQVAPASSKSVRFPLRPGKGTYGDRCI
VKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMGELVTLYRQSQLGGRLPAYDGRKS
LYTAGPLPFTSRTFEITLQDEEDSLSGGQGGQRRERVFRVVIKFAARADLHHLAMFLAGR
QADAPQEALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTHRG
NMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRP
NYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILQTVHHNAYYEDPYAQE
FGIRIDERLAAVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVSNWACIN
FSRNVQDSAARGFCHELAIMCQISGMDFALEPVLPPLTARPEHVERALKARYQDAMNILR
PQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKIN
VKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTK
YAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGV
SEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGN
ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYT
YARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPPGARSSRAAGSVAV
RPLPALKENVKRVMFYC
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtgaccttgacatggcgatgcgggtggagaacgggcgcccctatcaagtgccg
atcatggtgaggaagaagagaactggccctggtggctctggagaaacttctggagagtct
tcaggggcttctggacaaggttcctcacagcgacctgagcgaactcaacaacatggggga
ggacgcggctgggtgcctcaacagggtggccgtggtggcggtcaacaccaaggccgtggt
ggacactatcagggccgtggagggccagggccacatcacccgggtggtgggccacctgag
tatcacccgcgtgactaccagggacgtggcggtgaataccaaggacgtggcggtgactac
cagggacgtggtggtccccgtcccagaggtggaatgccacagccatactatggtgggcat
aggggaggtattgttggacgaaatgttcctccaggtccatccagaacagttcccgagctg
caccaagccccatatgtccagtatcaagccccgatggtttcaccatccccatcgggacct
ggctcatcctcacagcctatggcagaggggagctctggacatgtccagcaacaatttcag
caacttgcaattcgtggtcagacttccacaagccaagaaattcaagtggcaccggcctca
agcaaatcggttcgattcccgttacgccctggcaagggcacttatggggacaggtgcatt
gtgaaggcaaatcatttctttgctgagcttcctgacaaagaccttcaccaatacgatgta
tccataacacctgaggttacttcacgtggtgtcaatcgtgctgtcatgggagagcttgta
acgctgtatagacaatcccagttgggtgggcgtctaccagcctacgatggaagaaagagc
ctttatacagctggaccattgccatttacttctaggacatttgaaattaccttgcaagat
gaggaagatagtcttagtggtggccaaggcgggcaaaggcgcgagagagtatttagggtg
gtgatcaaatttgctgcccgtgctgatctccaccatttggctatgttcctagctggaagg
caagcagatgctcctcaagaagctcttcaagtgcttgacattgtactacgtgaactgcct
actgcgaggtattctcctgttggtagatcattttattctcccaacttagggagacgccag
caacttggtgagggtttggaaagttggcgcggtttttaccaaagcataaggccgacacag
atgggcctttccctgaatattgatatgtcatctaccgcgtttatcgagcctctccctgtg
attgattttgttgctcagcttcttaacagagatatctcagttagaccattgtctgattct
gatcgcgtgaagatcaaaaaagccttgagaggtgtgaaggttgaggtcacacaccgaggc
aatatgcgcagaaaatatcgtatttctggcctcacttcacaagcaacaagagagctatca
ttccctgttgatgatcgtggtactgtgaagactgtggtgcaatacttcatggagacttat
ggttttagtattcaacacaccactttaccttgcttgcaagtgggcaatcagcaaagacca
aattatctgcctatggaagtctgtaagatagttgaaggacagcgttactcaaagcgactc
aatgagaaacaaatcactgctctactgaaagtgacctgtcagcgccctcaagagcgtgag
ctggacatcttacagactgtgcatcacaatgcatactatgaagacccgtatgcacaggaa
tttggtataagaattgatgaacgccttgcagcagttgaagctcgtgttctgccaccacca
aggcttaaataccatgatagtggccgagagaaggatgttttgccaagagttggccaatgg
aacatgatgaacaagaaaatggttaatggcggcagagtcagcaactgggcgtgtattaac
ttttctcggaatgtgcaagatagtgctgctaggggcttctgtcatgagctggctatcatg
tgccaaatatctggaatggactttgctcttgagcctgtgctgcctccgctgactgcaagg
ccagaacatgttgagagagcattaaaggcacgttatcaagatgcgatgaacatactgaga
ccacaaggcagggaacttgacctgcttattgtaatactgcctgacaataatggttctctt
tacggggatctcaagaggatctgtgagactgatctaggattggtctcccagtgttgtctg
actaagcatgtttttaagatgagcaagcagtatcttgcaaatgttgcactcaaaataaat
gttaaggttgggggaaggaatactgtacttgtagatgctttgacaaggagaatccccctt
gtcagtgacagaccaactatcatatttggtgctgatgttacccatcctcatcctggagaa
gattccagtccttccattgcggctgttgttgcttcgcaagactggcctgaggtcaccaag
tatgctggactagtgagtgctcaagcccatcgccaggagctgattcaggatcttttcaaa
gtatggcaagatccacaaagagggaccgtaactggtggcatgatcaaggaacttctcatt
tcttttaagagagcaactggacagaaacctcagagaatcatattctacagggatggtgtc
agcgagggacagttctatcaagtattgctgtatgaacttgatgccatcagaaaggcctgt
gcatccttggagcccaattaccagcctccagttacttttgtggtagttcagaagcggcat
cacactaggttgtttgctaataaccacaatgatcagcgtacggttgatagaagtgggaac
atactgcctggcactgtggtcgattcaaagatttgccatcctactgagtttgatttctac
ctgtgtagccatgctggaattcagggaacaagccgcccagctcattatcatgtcctgtgg
gatgagaacaagtttacagctgatgagctgcagactctgacaaacaacctgtgctacacg
tacgctaggtgcacccgctccgtgtcgattgtgcctccggcatactatgctcatttggca
gccttccgagctcgcttctacatggagccagatacttctgacagtgggtcaatggcaagt
ggtgcccgtggccctccaccaggtgcacgcagcagcagggctgcagggagtgttgccgtt
aggcccctgcccgccctcaaggaaaacgtgaagcgcgtcatgttttactgctga
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