Panicum hallii (Hall's panicgrass): 112900699
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Entry
112900699 CDS
T07366
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112900699
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112900699
04147 Exosome [BR:
phai04147
]
112900699
04090 CD molecules [BR:
phai04090
]
112900699
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112900699
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112900699
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112900699
CD molecules [BR:
phai04090
]
Proteins
112900699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
ABC_ATPase
AAA
AAA_30
Motif
Other DBs
NCBI-GeneID:
112900699
NCBI-ProteinID:
XP_025825309
LinkDB
All DBs
Position
7:complement(35054959..35060285)
Genome browser
AA seq
1222 aa
AA seq
DB search
MTAGGVLAFADRLDLLLTALGTLGAVADGCSYNLLLVFASDVVNSLGRGHAAAQQGGASA
TATSCVRFMRDVEKSCLSYVYLALAVLPVAFLEGYCWSRTSERQVRRIRCLYLQAMLRQE
PGFFDSGDAAATAEIVGGISKDAAVIQEVLAEKVPLFLMHSTSFISGLAFSIYFSWRLAL
VASPLVLLLVIPGFIYGKYLVHLSCKSRHEYAKANFLVEQALGSIKTVYSFTAEKRIIQR
YATVLDGTIKLGIKQGIAKGLAVGCTGIAFAIWAFLAWYGSRLVMFRHESGGRIYAAAVS
FVLGGLSLGVALPELKHLTEASIAATRILEQINRVPQINADDSKGLMLDRLQGGIKFESV
HFAYPSRPDMPVLQDFNLQIPAGQTVALVGSSGSGKSTAIALVQQFYDASEGTVKIDEVD
IKELQLKWIRSKMGLVSQDHAMFGTSIRENILLGKPDASIDEIYSAAMAANAHNFIRELP
EEYETKIGERGALLSGGQKQRIAIARAFIRNPVILLLDEATSALDSESEMLVQHALDKAS
MGRTTLIVAHKLSTVKNADQIAVLDGGTIAEIGTHDELINKGGPYARLVKLQKMVNYINQ
ESEQLRASSTTRTSTSGPNVSSASPMPVTKTVSIKDDYAIPPPAPSFFKLVAMNAPELRQ
AVIGSLSALVYGVLQPIYATTIGSMVAAFFVQDYSEMNAIISRSALIFCSLSLISIVVNL
LQHYNFAYMGVHLVRRIRIQVLEKILTFEAAWFDEETNSSGSLCSQLSNEASLVKTLVAD
RISLLLQTVSGTVTAVTMGLALAWKLALVMIAVQPSTMICYYAKKTVLTNVSRDLAKAQH
QSTQIAIEGVYNHRMVTSFGCSSKVLQLFEHAQVEPLRKGRKMAWVAGITTGLSPCLLYL
SWALDFWYGGKLVQSGEISAADFFKTYFILMTTGKLIAEAGSMTSDLAKGANAVASVFEV
LDRKSPQNLQVGKDDQVNKIKGRIEFKKVDFAYPTRPQCVILKDFSFDVKAGSSVGLVGK
SGCGKSTIIGLIQRFYDVARGAVCIDGIDVRDINIPCYRGQAALISQEPAIFSCSVRDNI
AFGKPETDEDEIVEAAKAANAHEFISSLKDGYDTDCGEHGIQLSGGQKQRIAIARAITRN
PAILLLDEATSALDAQSEKMVQEALDRIMSGRTTIVVAHRLNTIKNLDSIAVLGEGKVVE
LGTYPQLMNMKGPFYNLATIQR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgggcggcgtgctggcgttcgcggaccggctggacttgctgctcacggccctg
ggcacgctcggcgccgtcgccgacgggtgctcctacaacctgctcctcgtcttcgccagc
gacgtcgtgaattcgctcggccgcggccacgccgccgcgcagcagggcggcgcaagcgca
acggcgaccagctgcgtgcggttcatgcgcgatgtcgagaagtcgtgcctgagttacgta
tacttggcgctcgcggtcttgccggtggcgttcctggaaggctactgctggagccggacg
agcgagaggcaggtgcggcggatcaggtgcctgtacctgcaggccatgctgcggcaggag
cccggcttcttcgactccggcgatgccgccgccaccgcggagatcgtcggcggcatctcc
aaggacgcggccgtcatacaggaggtcctcgccgagaaggttcctctgtttctgatgcac
tctacatctttcatctctggactggccttctccatctatttctcatggaggctggccctg
gtcgcttctcctctagtcctgcttctagtgatccctgggtttatctatggcaagtaccta
gtccacctctcctgcaagtcgcgtcatgagtacgccaaggcgaatttcctggtcgagcaa
gcactaggctcgatcaagaccgtttactcattcaccgccgagaaaaggatcatccagagg
tacgcaacggtccttgatggcacgatcaaactggggatcaagcaaggcatcgcgaaaggt
ctagcagttggatgcaccggcattgcttttgccatctgggccttcctcgcttggtatggc
agcaggttggtgatgttccgtcatgaaagcggagggaggatatatgctgcggcagtttcc
tttgttttgggtggcctatcccttggggtggctctccctgagctgaaacatttaactgag
gcatctattgctgccacaaggattctcgaacagataaaccgggtcccacaaattaatgct
gatgattcaaagggacttatgttggaccgacttcagggagggatcaagtttgaatctgtc
cactttgcgtacccatcaagaccagacatgccagtcctacaagacttcaacctccagatt
cctgctgggcaaactgttgctttagttgggtccagcggcagcggcaagtcaactgcaata
gcattggtgcagcagttttatgatgcaagtgaaggtactgtcaagattgatgaggttgac
attaaggaactccagctaaaatggatcaggagcaaaatggggcttgtcagccaggatcat
gccatgtttggtacttcaataagagagaacatcttgttagggaaaccagatgcatccatt
gatgaaatttactcagcagccatggcggcaaatgctcacaacttcattagggagcttcct
gaagaatatgagaccaagattggcgagcgcggagcattgctgtcaggtggccaaaagcag
cgtattgccattgcaagggcattcatcaggaaccctgttatacttctgcttgatgaagcc
acgagtgcacttgattccgaatcagagatgctggtgcagcatgcccttgataaagcatct
atgggaagaacaacactgatagtagcccataagctctctactgtgaagaatgctgatcag
atcgcagtacttgatggaggtacaatagctgaaattggtacccatgacgagctaatcaac
aagggtggcccatacgcaagactcgtgaaattgcagaagatggtgaactacatcaatcaa
gaaagtgaacaacttagggcttcctccacgacaaggaccagtaccagtggtcctaatgtg
tccagtgcaagtccaatgccagtcacaaaaactgtctcaataaaagatgattatgccatt
ccaccacctgcaccatctttcttcaagcttgttgcaatgaatgcaccagagttgaggcag
gcagtcataggcagcttgtctgcactggtatatggtgtcttgcagcccatttatgccaca
accattggcagcatggtcgctgcattctttgttcaggactacagtgagatgaatgcaatc
atcagccgctctgccttgatcttctgctcattatcattgatatccattgttgtgaatctt
cttcagcactacaattttgcatacatgggtgtgcatcttgttaggcgcatccgaatccaa
gtactcgaaaagatcttaacctttgaggcagcatggtttgacgaagaaactaattcaagt
ggttcattatgctcacagctaagcaacgaggcttctcttgtcaaaacccttgttgcagac
agaatctccttacttcttcaaacagtttctggaactgtaactgcagtgacgatgggtctg
gcattagcttggaaacttgctcttgtcatgatagctgtacaaccatctacaatgatatgc
tactatgccaaaaagacagttctcacaaatgtgtcaagggacttggcaaaagctcagcat
cagagtactcagattgccatagaaggtgtttacaaccacaggatggtaacctcatttgga
tgctcatcgaaggttcttcagctcttcgagcacgcgcaagtggaaccactgaggaaagga
aggaagatggcgtgggtagcagggatcaccacagggttgtcaccttgcctcttatattta
tcatgggcactagacttctggtatggtggaaagctggtacagtccggggagatctcagca
gctgatttcttcaaaacctattttatcctgatgacgacaggaaagctgattgctgaagct
ggtagcatgacatcagacctggcaaagggagcaaatgcagttgcttcagtgtttgaggta
ttggataggaaatctccacaaaatttacaggtgggaaaggacgatcaggtgaataaaata
aaaggaagaatagaattcaaaaaggtagattttgcatatccaacaagaccacagtgcgtt
atattgaaggattttagcttcgatgtgaaagcaggatcaagtgttggcctagttgggaaa
agtggttgtggtaaatcaactatcataggcttgatccagaggttctatgatgttgccaga
ggagctgtatgtattgatggtatagatgtgagggacataaatattccttgttatcgagga
caggcagctcttattagtcaggagccagcaatattttcatgtagtgtaagggacaacatt
gcttttggtaaacccgaaactgacgaagatgaaattgtggaagctgctaaagctgcaaac
gcacacgagtttatctcatctctgaaggatggatatgatactgattgtggcgagcatggc
atacaactctcaggaggacagaaacaaagaattgcaattgcaagggcaataacacggaat
ccagcaatactgctacttgatgaagcaactagcgctcttgatgcacaatcagagaaaatg
gtgcaggaagctctagatcgaatcatgtcagggaggacaacaattgtggtggcacatcgt
ctaaatacaatcaagaatttagactcaattgcagtcctaggagagggtaaggtggtggag
cttggaacttacccacagctcatgaacatgaaggggccattctataaccttgcaacaatt
cagagatga
DBGET
integrated database retrieval system
