Panicum hallii (Hall's panicgrass): 112900825
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Entry
112900825 CDS
T07366
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112900825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112900825
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
112900825
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
112900825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
112900825
NCBI-ProteinID:
XP_025825404
LinkDB
All DBs
Position
7:42838192..42839907
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AA seq
571 aa
AA seq
DB search
MAMASQPKQMFGEPISLVGPTAADLESTAELEKLLRGAGLYESPEESAVREEVLRDLQGI
VDRWVKQLTFQHGYPDAMVEEATALLVPFGSYRLGVHGRGSDIDVLVVGPSFADRDHDFF
VVLAGVLAETEAVHLQPVPGAHVPVMKMRFRGVQVDLVYASVNLAVVPRDLDLGDRSLLR
GLDHATARSLNGVRVADEILRLVPDAGAFRTTLRCVKHWAKARGVYSNVSGFLGGVAWAV
LVARVCQLYPNAAPSMLVPRFFKVLSQWRWPVPVMLRDIEHDAVLGLPVWDGRRNPRDRT
HLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHTACQEIVACGGRGWGALFQPFPFFR
AYKSYLQVDATVAGGEDELREWKGWVESRLRQLVAKVERDTAGELLCHQIPHAYDAEPRG
LPCTSSFFVGLSKSTPQQQQQQQQPQPPPPPQGRQQPQFDLRATTEEFLQDVYTYGFWRP
GLAVAVKHIRRKDLPPYVMQKIRSPNSDALKRKRSDDGSSSSSPLSSSSSPSSGEDDSGR
RSSRRAKLGSCIQHSNSLHGSGFSSPVEGVV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcttcccagccgaagcagatgttcggcgagcccatctctctggttggcccg
acggcggccgacctcgagagcacggcggagctcgagaagctcctgcgcggggcggggctg
tacgagagccccgaggagtcggcagtccgcgaggaggtgctgcgcgatctccagggcatc
gtcgaccgctgggtgaagcagctcaccttccagcacgggtaccccgacgccatggtcgag
gaggccaccgccctgctggttcccttcggctcctaccgcctcggcgtccacggccgcggc
tccgacatcgacgtcctcgtcgtggggccctccttcgcggaccgcgaccacgacttcttc
gtcgtgctggccggcgtcctggccgagacggaggcggtgcacctgcagcccgtgcccggc
gcgcacgtccccgtcatgaagatgcggttccgcggcgtgcaggtggacctcgtctacgcc
agcgtcaacctcgccgtggtgccccgggacctggacctcggcgaccggtcactgctccgc
ggccttgaccacgccaccgcccgcagcctcaacggcgtgcgcgtcgccgacgagatcctg
cggctggtcccggacgccggcgcgttccgcacgacgctgcggtgcgtgaagcactgggcc
aaggcgcggggcgtctactccaacgtgtccggcttcctgggcggcgtggcctgggccgtc
ctggtggcgcgcgtgtgccagctctaccccaacgccgcgcccagcatgctggtgccgcgc
ttcttcaaggtgctcagccagtggaggtggcccgtcccggtgatgctgcgcgacatcgag
cacgacgccgtgctcggcctccccgtctgggacgggcgccggaacccgcgcgaccggacc
cacctcatgcccgtcatcacgccggcgtacccgtgcatgaactgcacctacaacgtctcg
caggctacccagcggatcatcaaggagcagatccaggccggccacaccgcctgccaggag
atcgtcgcctgcggcggccgcggctggggcgcgctgttccagccgttcccgtttttcagg
gcgtacaagagctacctgcaggtggacgccacggtggcgggcggcgaggacgagctccgc
gagtggaaggggtgggtggagtcgcggctgcggcagctggtggccaaggtcgagagggac
acggccggcgagctgctctgccaccagatcccgcacgcctacgacgccgagcctcgcggc
ctgccgtgcacgtcgtccttcttcgtgggcttgtcgaagtcgacgccacagcagcagcag
cagcagcagcagccgcagccgccgccgccgccgcaggggcggcagcagccgcagtttgat
ctccgtgcgacgacggaggagttcttgcaggacgtgtacacgtacggcttctggaggccc
ggcttggcggtggccgtcaagcacatccggcggaaggacctgccgccgtacgtgatgcag
aagattcgtagcccgaatagcgatgcgctcaagaggaagcgcagcgacgacggatcctcc
tcttcgtcgccattgtcgtcttcgtcctccccctcctctggtgaggacgactccggccga
agatcgagcagacgtgcgaagctcggaagctgcatccagcatagtaattctcttcacggc
agtggctttagttctccagtagagggcgtcgtctga
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