KEGG   Panicum hallii (Hall's panicgrass): 112900961
Entry
112900961         CDS       T07366                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112900961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112900961
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112900961
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Zn_ribbon_RanBP Vps36-NZF-N G-alpha AAA_29 zf-Sec23_Sec24
Other DBs
NCBI-GeneID: 112900961
NCBI-ProteinID: XP_025825528
LinkDB
Position
7:complement(47194696..47199693)
AA seq 732 aa
MVGILFLLFPRALHGWYEPRLEDTCGRSGNHRDSSATGLGIRDDNRSELEKPFTDPGMWQ
CSICTHENDTSNLSCELCGVLRDLSLYFNNISEAEAGAKRRNKYSGVSVLARSLFASSST
KSKAIIFSDGSQDNRNATGNKQATMDALHKTYMPSKKRHINIGTAMLSSSLFPFKFDTPS
PDDMVTTGLKSSRNFRKVVQIKDSVDATGKKMMDSGILQTEKDTSMDPCTSAEVDKLGGT
SSSVPSSNQQVTPILDHELQHLSLESKPKSSKPKIKKPASISEYKPEPWMLQSEDQEMRR
QLNLAIVGHVDSGKSTLCGRLLHALGLISKKQMHKYEKEAKEKGKGSFAYAWAMDDSTDE
RERGITMTVAVKYFDTEKYHVVLLDSPGHKDFVPNMISGATQADAAILVVDASVGSFEAG
MGVSGIGQTKEHSQLIRSFGVENLIVAVNKMDMVEHSKDRFNFVKLQLGIFLRSCGFKDS
SITWVPLSAMANENLVTAASDSRLLSWYNGNCLLESIDSLPPPHRDVSRPLRLPICDVIA
SITLGQVAVCGKVEAGGIRTGSKVLVMPSGDLATVKTIERDSSSCNLARAGDNIAVGLQG
VDPGHLVSGGVICHPDFPVHVASRLELKILVLEITTPILVGLQFELHIHHARVSASLVKI
LSLLDQKTGKASKKMPRLLTARQAAVVDVKLDKEVCVEEFSALKALGRAFLRSGGNTVAV
GIVTRILDEAKV
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggtaggaattttgtttctgctgtttcctcgagccttacatggttggtatgaacccaga
ctcgaagatacgtgtggaaggagtggcaaccacagagatagtagtgctactggtctgggg
ataagagatgataacaggtctgagcttgagaagccctttacagatcctgggatgtggcaa
tgctccatttgcactcatgaaaatgatacgagtaatttatcctgtgagctatgcggtgta
cttcgtgatctgtcgctgtatttcaataatatcagtgaagctgaagctggagctaaacgc
agaaacaagtattctggagtatccgtactggcaagatctctttttgcgtcatctagtacg
aaatcaaaggctattattttctctgatggctcccaagacaatagaaatgcaacagggaat
aagcaagctaccatggatgctctgcataagacatacatgcccagcaaaaagcgccacatt
aacataggtacagctatgctcagcagttctttgtttcctttcaaatttgatacgccctct
cctgatgatatggtcactacaggcttaaaatcatcaagaaattttagaaaagtggttcaa
attaaagattcagttgatgccaccggaaagaagatgatggatagtggtattcttcaaact
gaaaaggatacaagtatggatccatgtacatcagctgaggtggataaacttggcggaact
agtagcagtgttccttccagtaatcaacaagtaactcctattttggaccatgagctacag
catttgagtttggagagcaagccaaagagcagtaaacccaagattaagaaaccagcttct
atttcagagtacaagccagaaccatggatgctccagagtgaagaccaggaaatgcgtaga
cagctaaatcttgccattgtcgggcatgttgattctgggaaatcaactttatgtggtcga
ttactacatgctctgggattgatttcaaaaaagcaaatgcataaatatgagaaagaagct
aaagaaaaggggaaaggatcatttgcatatgcttgggccatggatgacagcactgatgag
agggagcgtggaattacaatgactgtggctgtaaaatattttgacactgaaaaataccat
gtagttttgctcgactcccctggtcataaagattttgttcctaacatgatatctggggct
acacaagcggatgcagccatcctagttgttgatgcatctgtaggctcatttgaagcaggt
atgggtgttagtgggattggtcagacaaaggagcactcacaacttattaggagctttggt
gttgaaaacttgatagttgctgttaataagatggatatggtagaacattcgaaggaccgg
tttaattttgttaaattgcaacttggtatcttccttcgatcatgtgggttcaaagactct
tcaatcacctgggttcctttgagtgcaatggcaaatgaaaacttagtgactgctgcttcg
gattctcgtcttttgtcatggtacaatggaaattgtctgctggaatccatcgactcattg
ccccctcctcatcgtgatgtttcaaggccactacgccttccaatctgtgatgttattgct
tctatcacactggggcaggtggcagtttgtggtaaagtggaggctggaggaatccgaact
ggttctaaggttcttgtcatgccatccggagatttagctacagttaaaaccatcgagcgg
gattcctctagttgcaacttggcaagagctggggacaacattgctgttggtttgcaaggg
gttgaccctggtcaccttgtgtcgggtggagttatatgccatccagatttccccgtacac
gttgcttctcgcttggagctgaaaattttggttctagaaatcactacaccaatactggtt
ggcctccagtttgaactgcacatacatcatgcgagggtgtctgcaagcttggttaaaata
ctgtcgttgctggaccagaagaccggcaaggcctcaaagaaaatgccacgcctgctcacc
gcgaggcaggctgctgtagttgatgtaaagctggacaaggaggtctgcgtggaagagttc
tcagctctgaaggcccttggtcgagcgttcctgcggtctggtggcaacaccgttgcagtg
ggcattgtgacccgaatcctggacgaggctaaggtttag

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