Panicum hallii (Hall's panicgrass): 112901236
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Entry
112901236 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112901236
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112901236
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112901236
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING-like
zf-RING_Vps41
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
112901236
NCBI-ProteinID:
XP_025825887
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All DBs
Position
7:42802318..42804012
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AA seq
381 aa
AA seq
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MSSSASSLQSPPAGAIGGTSPYSASSSFLPSFMIIAALLAFVFLASVSIHLLLRFLSSAV
RASSSSSSGPPLPRTHRDGEAGSGSPGSAADYSAERPAAAAAEGGKKEEAPGDEKQRLID
SLPLFTMASALAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTPSCP
LCRAAVAPPHPSLAAAMRAAAQQPQRSRGQSGPSFLVEIGTVSNRGSSPAVARGGDRNSR
TYSLGSFDYQIDEEVEAVVSRVARIIAARESSTVKEEKPPAEEGSAPSLAGAPVPSPPGE
AVAEAAGSSRGWLREYVDRLASSAYTFSERWSSRWSPGGQQRQEEPWLWDAEAAGMSAPP
GSDDDEEETAFMVMYRWIAGV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctccgcctcgtctctccagtcgcctcccgccggcgcgataggcggcacgtcc
ccctactccgcgtcctcgtcgttcctcccctcgttcatgatcatcgccgcgctgctcgcc
ttcgtcttcctcgcctccgtctccatccacctcctgctccgcttcctctcatcagcagtc
cgcgcctcctcctcctcctcgtcggggccgccgctcccccggactcaccgcgatggtgag
gcggggtcggggtcgccggggagcgcggcagattattcagcggagagacccgcggcagcc
gcggccgagggcgggaagaaggaggaggcgccgggcgacgagaagcagcggctgatcgac
tcgctgccgctgttcacgatggcctcggcgctggcggcgctgcccaagagctcgcccgac
tgcgccgtctgcctgtcgccgttcacgcccgacgcggagctgcggctgctccccgcgtgc
cgccacgcgttccacgccgcctgcgtcgacgcctggctccgcaccacgccgtcctgcccg
ctctgccgcgccgccgtcgcgcccccgcacccctcgctcgccgccgccatgcgcgccgcc
gcgcagcagccgcagaggagcagggggcagtcggggccgagcttcctcgtggagatcggc
accgtcagcaaccgcggctcgtccccggcggttgcccgcggcggcgacaggaatagccgc
acctattcgctcggctccttcgactaccagatcgacgaggaggtggaggccgtggtgtcc
cgcgtcgcgcgcatcatcgccgcgagagaatcgagcaccgtcaaggaggagaagccccca
gccgaggaagggtccgcgccttcgctggccggggcgccggtgccctcgcctcccggcgaa
gcggtggccgaggcagcgggctcctcgcgcgggtggctgcgggagtacgtggaccggttg
gcctcgtcggcctacacgttctcggagcggtggagctcgcggtggagcccgggggggcag
cagcggcaggaggagccgtggctctgggacgcggaggccgcgggaatgtcggcgccgccg
gggtcggacgacgacgaggaggagacggcgttcatggtgatgtaccgctggattgccggg
gtgtaa
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