Panicum hallii (Hall's panicgrass): 112901449
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Entry
112901449 CDS
T07366
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112901449
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112901449
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Helicases
112901449
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
112901449
NCBI-ProteinID:
XP_025826161
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All DBs
Position
7:complement(39307546..39313534)
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AA seq
834 aa
AA seq
DB search
MAEPPQQPSSGPTTPPQEDNQSAKTNSKKNRGTKKSKRASASSLGSSTMAEDPFFVLAGG
KEGGFLELEEIDEADFRIVGGDVKDVGADEGKAGKNDGKKKKKKKKKRKRGDDDQKKRNA
DDDEGLSGDDDSVVENEQEGEKEKKTTKRKRNMKKRKVKDSEKSGEGNEEVADDNAEDMQ
DENENMEQDKDDELILGEDDVFAWHELRLHPLLVKAMRRLGFKEPTPIQKSCFPAAAHQG
KDVIGAAETGSGKTLAFGLPILQRLLEEREKAARLHQDDEKMEESSRGSPLRALILTPTR
ELAKQVCDHLKDAAKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWELMSMNNQ
HLVELHSLSFFVLDEADRMIERGHFHELQSIIEMLPLTNGSDEQAARTMPNCETVPILQI
KKRQTFVFSATLALSSNFRKKLKRGLSTSKASTDDVSSIEALSKQAGMKPNAEIVDLTKA
SILPEKLEESFIECSEEDKDAYLYYILSVHGQGRTIIFCTSIAALRHISSILRILGINVL
TNHAQMQQRARMKAVDRFRGSGNSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRS
GRTARKSLAGCSIAIICPADKSKFYSLCKSLSKENLQQFPVDHAYMPEVMDRLSLARQID
KIARKSSQENANKSWLQRNAESMGLLLETSDSEEERVKGHKQRKATSAHLQKLQQELSDL
LKRPLQPKTFSRRYLAGAGISPLLQKQLEELAKRNVSNKSSKTENKGSCLVVIGQDRVEP
LQALQNSGQEVCVNLDKEKEKRRLAQNWKRKKHEEKKRTREQKRKQRRKAKGTE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccaccgcagcagccatcatcgggccccaccactccgccgcaggaagacaac
caaagcgctaagacaaatagcaagaagaaccgcggcacgaagaaatcgaagcgagccagc
gcctcctcgttgggctccagcaccatggctgaggacccgttcttcgtcctcgccggcggc
aaggaaggagggttcctggagttggaagagattgacgaggcggacttcaggattgtaggg
ggagacgtgaaggacgtgggagcagatgaggggaaggcgggcaagaacgatgggaagaag
aagaagaagaagaagaagaagcggaagcgtggggatgatgaccagaagaagaggaatgcg
gatgatgacgagggcttgagtggcgatgacgattcggtagttgagaatgagcaggagggg
gagaaggagaagaagacgacgaagagaaagaggaacatgaagaagaggaaggtgaaggat
agtgagaagagtggggagggcaatgaggaagtcgccgacgacaatgcagaagacatgcaa
gatgaaaatgagaatatggaacaagataaggatgatgagcttattttgggcgaggatgat
gtttttgcatggcacgaacttaggcttcaccctctgctagtcaaggcaatgcgcaggctt
ggattcaaagagccaactcctatacaaaagtcttgctttcctgcagcagctcatcaaggc
aaggatgttattggtgcagcagagacaggttctgggaagacacttgcttttggcctcccc
attttgcaacgtctccttgaggagcgagaaaaggctgcaagattacaccaggatgatgaa
aaaatggaggaaagttctcgaggaagccctcttcgtgctcttattttgacacccaccagg
gagcttgcaaaacaggtatgcgatcatctaaaagatgcagccaagttcttaggaatccat
gttgttcctattgttggtggtctatcaatggaaaagcaagaacggcttttgaaaaagaag
cctgaaattgttgttggaactcccggaagattgtgggagctcatgtcgatgaacaatcaa
cacctagttgagctgcattcgttgtcattctttgtgttggatgaggctgatagaatgatc
gaacgaggccattttcatgaattacaatctatcattgagatgctcccgctgactaatggt
tctgatgaacaagctgcaagaacaatgccaaactgtgagactgtgccaatcttgcaaata
aagaagaggcaaacctttgtgttctcagccacacttgcactttcatctaatttccgaaag
aagctgaagcgtggcctatctacttcaaaggcatcaaccgatgatgtgagctctattgaa
gcactgtcaaagcaggctggaatgaaaccaaatgcagaaatagttgatctgacaaaggct
tcaatcttgcctgagaagcttgaagaatcttttatcgagtgcagtgaagaggataaggat
gcctatctgtattatatactgagtgttcatgggcaaggtcgcacaataatattttgtaca
tcgattgctgcattacgccacatttcctccatattgcgcattcttggaattaatgtcttg
acaaaccatgctcaaatgcaacaaagggctcgcatgaaggctgtggatcgtttccgtgga
agtgggaattccattttggtcgcaactgatggttttgcaaggggtatggattttgatgat
gtgcgaacagttatccactatcagttgccacattcaactgatgtttatatccatagaagt
ggaaggacagcacgcaaatcgttggctggctgcagcattgcaataatttgtcctgctgac
aagtcgaagttttactctctttgcaagtcattgtcaaaggagaacctccagcaatttcct
gtagatcatgcttacatgcctgaggtaatggataggctctcacttgctcggcagattgac
aagattgcgcgtaaaagttcacaggaaaatgctaacaaatcctggcttcagaggaatgct
gaatccatgggattgctattggagaccagtgacagtgaagaagaacgtgtaaaaggccac
aagcaacggaaggcaacttctgcacatctccaaaagcttcaacaggaattgagtgatctt
ttgaaacgccccttgcagccaaagactttctcacgacgctatttggctggggctggtatt
tcaccattacttcagaagcaactagaagagttggccaagagaaatgtaagcaacaaaagc
agcaagactgagaataaagggtcttgccttgttgttattggtcaggatcgtgtcgaaccc
ttacaagcacttcagaattctgggcaagaggtctgtgtgaacttagacaaagaaaaagaa
aagcgaagacttgctcagaactggaagcggaagaagcatgaagaaaagaaacgcacacga
gagcagaagagaaagcagaggagaaaagctaaggggacggagtaa
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