Panicum hallii (Hall's panicgrass): 112901455
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Entry
112901455 CDS
T07366
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112901455
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112901455
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112901455
NCBI-ProteinID:
XP_025826167
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Position
7:complement(41665250..41685583)
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AA seq
440 aa
AA seq
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MQLARRSIAHSLMREELNNDGSCRAPPSASSAPPSCSPASPAPRAARPAATSCSTSWPTA
REATAPRTTPRYVSPTSGRRRRPGVLTVPWCVSLVSLKAFQAAWAPGGVGDDGRAGSEVV
PRRPRELPRALRPRKNHRAGPGQDYGATIDGGEHMEQGEEQLLAHVQSRGRSPRRQYNGQ
SWWVRKYSDVPCVQSAPTALTLVRCNNLEVSRISSKDSPQMHVAILQSSGITLRKLNITA
PGSSPNTDGIHIEQSQNVRVADSRIGTGDDCISVSSGSSFVAVDGIECGPGHGVSIGSLG
KNGDTAAVEFVDVRNVRFTDSMNGARIKTWEGGQGYAKSISFTNIEFDNVDHPVLIDQFY
RDRSVQVGVAISNVTYSNLRGTSSRATTVAFDCSGGGGCTDIHVNSMVITGPGGRRTVAR
CRNAQVAISGQVYPEIPCRS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagcacgacgatcgatcgcccattcgctcatgcgcgaggagctgaataatgat
ggatcttgcagggcgccgccatcggcatcatctgcgccgccatcctgctcgccggcctcg
ccggccccgcgtgccgcgcggccggcggcgacctcctgttcgacgtcgtggcccacggcg
cgagaggcgacggcaccacggacgacaccaaggtacgtgagtccaacatccggtcgacgg
cgccggccgggcgtgctcactgttccgtggtgtgtgtctctggtttctctcaaggcgttc
caggccgcgtgggcgccagggggcgtcggcgacgatggtcgtgccggctcggaggtcgtt
cctcgtcggccccgtgaacttccacgggccctgcgcccccggaagaatcaccgtgcaggt
ccggggcaagattacggcgccaccatcgacggcggtgagcacatggagcagggtgaggaa
caactactggctcatgttcagtcgcgtggacggtctcctcgacggcaatacaatggccaa
agctggtgggtcaggaaatacagcgacgtcccttgcgttcagtcagcaccgacggcgctg
acgctggtgaggtgcaacaacctggaggtgagtcggatcagcagcaaggacagcccgcag
atgcacgtcgccatcctccagagcagcggcatcaccctgcggaagctcaacatcaccgcg
ccggggagcagcccgaacacggacggcatccacatcgagcagagccagaacgtgcgggtc
gccgactccaggatcggcacgggcgacgactgcatctccgtaagctccggcagcagcttc
gtcgccgtcgacggcatcgagtgcgggcctggccacggagtaagtatcgggagcctgggc
aagaatggagacacggccgccgtggagttcgtcgacgtgaggaatgttcgcttcaccgat
tcgatgaacggggccaggatcaagacgtgggagggtggacaagggtacgcaaaatccatc
tcgttcaccaacatagaattcgacaacgtggaccaccccgtgctcatcgaccaattctac
cgagaccgctctgtgcaggtgggcgtggcgatcagcaacgtcacgtacagcaacctgagg
ggcacctcaagccgggcaacgaccgtcgcgttcgactgcagcggcggcggcggctgcacg
gacatccatgtcaactccatggtgatcacggggccaggtggccggcgaacagtcgcccgc
tgccggaacgcgcaggtggccatctccggacaggtttacccggagatcccgtgccgcagc
tag
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