Panicum hallii (Hall's panicgrass): 112901478
Help
Entry
112901478 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RNF14-like
KO
K11971
E3 ubiquitin-protein ligase RNF14 [EC:
2.3.2.31
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112901478
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112901478
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112901478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
IBR
IBR_1
FYVE
zf-RING_2
Zn_ribbon_19
FakA-like_M
Motif
Other DBs
NCBI-GeneID:
112901478
NCBI-ProteinID:
XP_025826189
LinkDB
All DBs
Position
7:43074454..43079080
Genome browser
AA seq
633 aa
AA seq
DB search
MPRKSSRARGAATQGPDGPTAAPRPPVKAGPPNPSPAAELPQAAPAAAQALERLHLDPAS
DGDPPPPPPPVTEPEAPAPSQPPPVEASSSGRSEAGGSLEEEAVRKLHELAEAGGEEVAL
TEEEVRANDQRQEDELCALEAIFGDAVVILDRKGGQRCFQVHVHIEIPDAIDVSTRLNYG
DGKLKYGATSDADADDLDYKFRVEHLPPILLTVLLPASYPSHHAPFFTISTYWLDKGMIS
SLCRMLDMLWEEQQGMEITYQWVQWLQSSSLSHLGFGNEIILGKNDVTCDADKRACLDNA
SPDFIIPRMMRYNDNKHHEAFLHAIHDCMICFSECPGFDFIKLPCHHFFCWKCMQTYCKM
NVKEGNVVKLLCPDTKCEGAVPPNILKRLLGEDEFERWEGLLLQRTLDAMSDVVYCPRCQ
TACLEDVGNEAVCSSCLFSFCTLCRNRRHIGEQCMSPEERLLILEKRQQSGQVQGDQQRI
LEELRSLKEIMKDAKQCPRCKMAISKTEGCNKMHCENCGEYFCYQCNRAITGYEHFKGSC
VLFPQEELDRWEMQMNQRVRRQVVAQAHAEMHALHGQVHPCPTCRQPSPKVGNNNHLFCW
ACQKHFCALCHKPVPKPAQHYGPKGCKQHTADP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaagtcgtccagggcgaggggcgcggccacgcaaggccccgatggtcccacg
gcggcgccgaggcctcccgtcaaggccggccccccaaaccctagccccgctgccgagctg
ccccaggccgcccccgccgccgcccaggccctggagcgcctccatctcgaccccgcttct
gatggtgatccgccgccgccgccgcctcccgtgaccgagcccgaggcacctgcgccgtct
cagccgccgcccgtggaggcgtcgtcgtctggaaggtctgaggcgggcgggagcctggag
gaggaggctgtgaggaagctgcacgagcttgcggaggctggtggggaggaggtggcgttg
actgaggaggaggtgcgcgccaatgatcagaggcaggaggacgagctttgtgccctcgaa
gccatttttggggatgctgtggtaattttggacagaaagggaggccagcggtgtttccag
gtccatgttcacattgagattccagatgctatagatgtatcaacaaggctcaattatggt
gatggaaaattaaaatatggggcaacatctgatgctgatgctgatgaccttgattacaag
tttagagttgagcatttgcctccaatccttctaacagttctcctgcctgcatcgtaccca
agtcaccatgctccttttttcactatctccacatattggcttgataaagggatgatttcg
tcgttatgtcgcatgcttgatatgctttgggaagagcaacaggggatggaaataacatat
caatgggtgcagtggctccaaagttcttccctttctcacttagggtttggtaatgagata
atattgggcaagaatgatgtaacatgtgatgcagataagcgtgcttgtctagataatgct
tcaccagattttataattccaaggatgatgagatacaatgacaataagcatcatgaagct
ttcttacacgctatccatgactgcatgatttgtttcagcgagtgtcctggttttgatttc
atcaaacttccgtgtcatcatttcttctgctggaaatgcatgcaaacatactgcaaaatg
aatgttaaggaaggaaatgttgtgaagttgctatgtcctgatacaaaatgtgaaggtgct
gttcctcctaatatattgaaacggctgcttggagaggatgaatttgaacgttgggaggga
ttactgcttcaaagaacccttgatgccatgagtgatgttgtctattgtccaagatgccaa
actgcttgcttggaggatgtaggcaatgaagcagtgtgttcaagttgtttattcagcttc
tgcactctctgtagaaatcgccgtcatattggagagcaatgtatgtctccagaagaaaga
ctccttatcttggagaaacgccaacaatctgggcaagtgcaaggagatcagcagagaatt
cttgaagaactacgcagcctgaaggaaattatgaaggatgcaaaacagtgtccaagatgc
aagatggccatatctaagacagaaggatgcaataagatgcattgtgagaactgtggggag
tacttctgttatcaatgcaaccgtgcaatcactggatatgagcatttcaaaggttcttgc
gtgctttttcctcaggaggaactggacagatgggaaatgcagatgaatcaaagggtacgg
cgccaagttgttgcacaggcacatgctgaaatgcatgcactgcatggtcaagttcatcct
tgtccaacatgccgtcaaccatctccaaaggttggaaacaacaaccacctgttctgctgg
gcatgccagaagcatttttgtgccctgtgccataagcctgtcccaaagccggcacagcac
tatggtcccaaaggttgcaagcaacatacggcagatccctga
DBGET
integrated database retrieval system
