KEGG   Panicum hallii (Hall's panicgrass): 112901660
Entry
112901660         CDS       T07366                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112901660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112901660
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112901660
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112901660
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 112901660
NCBI-ProteinID: XP_025826404
LinkDB
Position
7:36193685..36197141
AA seq 128 aa
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ
YCDVPLGLYVIRGENVVLIGELDREKEELPAHMTCVSEAEIRKAEKAEREARDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggccgggcccgacgagatcctcctctccacctccctcgccggcttcttggac
aagaagcttattgtgctgctaagagatggacggaaactgcttggcaccctatgctcattt
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgttggggagcaa
tattgtgatgttcctcttggtctgtatgtgatacggggagagaatgttgttttaattgga
gaattggaccgcgaaaaggaggaactccctgctcacatgacctgtgtctcagaggcagaa
attagaaaggctgagaaggcagaaagggaggcaagagacctgaaaggcacgatgaggaaa
cggatggagttcctagacttcgactag

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