Panicum hallii (Hall's panicgrass): 112901660
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Entry
112901660 CDS
T07366
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112901660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112901660
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112901660
mRNA degradation factors
5'-3' decay
Lsm complex
112901660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
112901660
NCBI-ProteinID:
XP_025826404
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All DBs
Position
7:36193685..36197141
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AA seq
128 aa
AA seq
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MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ
YCDVPLGLYVIRGENVVLIGELDREKEELPAHMTCVSEAEIRKAEKAEREARDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggccgggcccgacgagatcctcctctccacctccctcgccggcttcttggac
aagaagcttattgtgctgctaagagatggacggaaactgcttggcaccctatgctcattt
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgttggggagcaa
tattgtgatgttcctcttggtctgtatgtgatacggggagagaatgttgttttaattgga
gaattggaccgcgaaaaggaggaactccctgctcacatgacctgtgtctcagaggcagaa
attagaaaggctgagaaggcagaaagggaggcaagagacctgaaaggcacgatgaggaaa
cggatggagttcctagacttcgactag
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