Panicum hallii (Hall's panicgrass): 112901890
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Entry
112901890 CDS
T07366
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03030
DNA replication
phai03410
Base excision repair
phai03420
Nucleotide excision repair
phai03430
Mismatch repair
phai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112901890
03410 Base excision repair
112901890
03420 Nucleotide excision repair
112901890
03430 Mismatch repair
112901890
03440 Homologous recombination
112901890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112901890
03400 DNA repair and recombination proteins [BR:
phai03400
]
112901890
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112901890
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112901890
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112901890
MMR (mismatch excision repair)
DNA polymerase delta complex
112901890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
112901890
NCBI-ProteinID:
XP_025826538
LinkDB
All DBs
Position
8:complement(4280679..4290984)
Genome browser
AA seq
1103 aa
AA seq
DB search
MSSAGRGGKRRGPPPPAPSGAAAKRANPGAPQPPPPAAAAAPAAEEEDMMDEDVFLDESI
LAEDEAALLMLQRDEALASRLARWKRPALPADLATGCSRPVAFQQLEIDYVIGESHKELL
PNSSGPAAILRIFGVTREGHSICCQVHGFEPYFYIGCPSGMGPDDISRFHQTLEGRMKES
NRSSNVPRFVKRVELVQKQTIMHYQTQQSQPFLKIVVALPTMVASCRGILERGITIEGLG
SKSFLTYESNILFALRFMIDCNIVGGNWIEVPAGKYRKAARVMSYCQLELGCLYSDLVSH
AAEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTHQGEGQPFVRNVMTLK
SCSPIVGVDVMSFDTERDILLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEVLKIAEF
PFLGRIRNSRVRVRDTTFSSRQYGVRESKDVTIEGRVQFDLLQAMQRDYKLSSYSLNSVS
AHFLGEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARV
TGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQGSGQDTFEGATVLEASAGFYEK
PIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESLNKTPSGEIFVKPDLQKGIL
PEILEELLAARKRAKADLKEAKDPLERAVLDGRQLALKISANSVYGFTGATVGQLPCLEI
SSSVTSYGRQMIEHTKKLVEDKFTTVGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGR
EAADYISGTFTKPIKLEFEKVYFPYLLISKKRYAGLYWTNPEKFDKMDAKGIETVRRDNC
LLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVK
AAHVELAERMRKRDPATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPQYY
LENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLTCLGCKAVI
SGASQTLCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPI
FYRRRKAQKDMAEARLQLDRWDF
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagccgggcgcggcggcaagcggcggggccccccgccccccgcgccctccggg
gcggcagcgaagagggccaaccccggcgccccgcagccgcctccacccgcggcggcggcg
gcacccgccgcggaggaggaggacatgatggacgaggacgtgttcctcgacgagtccatc
ctggccgaggacgaggccgcgctgctgatgctccagcgcgacgaggccctcgcgtcccgc
ctcgcgcggtggaagcgccccgcgctcccggccgacctcgccaccggctgctcccgcccc
gtcgcttttcagcagttggaaatagattatgttattggtgagagccacaaagaactgttg
cccaactcatcaggtcctgcagcgatacttaggattttcggtgtcaccagagaaggtcat
agcatatgctgtcaagtgcatggatttgaaccatatttctatattggttgtccttcaggg
atgggccctgatgatatatcacgctttcaccaaacactggaggggaggatgaaggagtca
aatagaagtagcaatgtgccaaggttcgtgaagagagttgagcttgtgcagaagcaaaca
attatgcattaccaaacacagcaatctcagcctttcctcaagatagtagtcgctttgccg
acaatggttgctagctgccgcggtatcctggaaaggggcataacgatcgaaggccttggt
tcaaagagtttcctaacatatgaaagcaacattctttttgccctacgtttcatgattgat
tgcaatattgttggtggcaactggattgaagttcctgctgggaagtacaggaaagcagcc
cgcgtcatgtcctattgtcagctagagttgggttgcctatattcagatttggtaagccat
gctgctgaaggagaatattctaagatggccccatttcgcatattgagtttcgatattgaa
tgtgctggtcgcaaaggccatttcccagaaccaactcatgatcctgttattcagatagct
aacttagtcacacatcaaggagaaggccaaccttttgtacggaatgtcatgactcttaaa
tcatgctctcccattgttggagttgatgtaatgtcatttgatactgagagagatattcta
cttgcttggagggatttcatacgtgaagtggatcctgatatcataattggatacaatatt
tgcaaatttgacttgccctatcttattgagagggctgaggttctaaagatagcggagttt
ccattccttggccgaatcagaaacagtcgtgttcgtgtccgtgatacgaccttttcctcg
aggcaatatggtgtgcgtgaaagtaaggatgttactatcgagggaagagtacaattcgat
ctcctgcaggctatgcaacgggattacaagctgagttcttattcattgaactctgtatct
gcacacttccttggggagcaaaaagaggatgttcatcattcaattatatctgatcttcaa
aatggaaactcagagacacgaagacggctggcagtttattgcttgaaggatgcctatctt
cctcaaagacttttagataaattgatgtatatctacaactatgtggaaatggcgagggtc
actggtgttcccatttcatttctactttcaagggggcagagcattaaggtcctctcacag
ctactaaggaaagcaaaacagaaaaaccttgttatcccaaacataaagggtcaagggtct
ggacaagatacctttgagggtgcaactgttttggaggcaagtgctggattttatgagaag
cccattgcaactttggactttgcttctttgtatccgtccatcatgatggcatataatctt
tgctactgtactttggtgccccctgaggatgcccggaaactcaatttacctccagaaagc
ctcaataaaacaccatctggtgaaatattcgtgaaaccagatctacagaagggtatactt
cctgagatccttgaagaattgttggctgctcggaaaagggcaaaagcagatttaaaggaa
gcaaaggacccactagaaagggctgttcttgatggtcgtcagcttgcattgaaaataagt
gcaaactcggtttacggtttcactggagcaactgttggtcaattaccttgtttagagatt
tcttcaagtgtgaccagctatggccgacagatgattgaacatacaaagaagcttgttgaa
gataaattcacaacagtaggaggttatgagcataatgcagaggtaatttacggggatact
gattctgtgatggtacagtttggtgtttctacggttgaagatgcaatgaagttgggtaga
gaagctgcagattatattagtggaacatttactaagcctatcaagctggaatttgaaaag
gtctactttccttacctgctcatcagcaaaaagagatatgctggtttgtactggacgaat
cctgagaaatttgacaagatggatgcaaaaggtattgaaactgtaagaagagacaactgt
ttattggtaaagaacctcgtaactgagtgtcttcataaaatactagtggaccgtgatgtt
cctggtgcagttcagtatgtcaagaacaccatatcagatctattaatgaatcgtgtggac
ttgtctcttcttgttataacaaagggtttgactaaaacaggagaagattatgcggtaaaa
gctgctcatgtggagcttgctgagaggatgcgaaagagggatcctgctactgcacctact
gttggtgaccgtgttccatacgttataatcaaagcagcaaaaggagcaaaggcatatgag
aagtcagaagatccaatttatgttttggacaataacatacccatagatcctcaatactac
cttgagaaccagattagcaagccacttttgaggatcttcgaaccaattctgaagaatgcc
agcaaagaattgcttcacggaagtcacacacgatctgtttccatctcaactccttcaaac
agtgggataatgaaatttgcaaagaaacaacttacatgtcttggatgcaaagctgttatc
agtggtgccagtcagacactctgctcacactgcaagggaagagaagcagagttatactgc
aaaacagtagcaaatgtatctgacctggagatgctctttgggaggttatggacgcagtgc
caggaatgccaaggatctctgcaccaggatgttctctgcacaagtcgggattgcccgatt
ttctaccgacgaagaaaggcgcagaaggacatggcggaagctaggctgcagctcgatcgc
tgggacttctag
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integrated database retrieval system
