KEGG   Panicum hallii (Hall's panicgrass): 112902128
Entry
112902128         CDS       T07366                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03020  RNA polymerase
phai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112902128
  09124 Replication and repair
   03420 Nucleotide excision repair
    112902128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phai03021]
    112902128
   03400 DNA repair and recombination proteins [BR:phai03400]
    112902128
Transcription machinery [BR:phai03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112902128
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112902128
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_4 Zn_ribbon_RPAB4
Other DBs
NCBI-GeneID: 112902128
NCBI-ProteinID: XP_025826843
LinkDB
Position
8:43899169..43900828
AA seq 115 aa
MSTMKFCRECNNILYPKEDRENKVLLYACRNCDHQEVSDSNCVYRNVVDHAAGEFTQVLF
EDVASDPTLPRTKSVRCAACGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD
NT seq 348 nt   +upstreamnt  +downstreamnt
atgagcaccatgaagttctgccgggaatgcaacaacatactgtaccccaaggaggacagg
gagaacaaggtgcttctctatgcctgcaggaactgtgaccaccaggaggtgtccgacagc
aactgcgtgtaccggaatgtggtggaccacgccgccggcgagttcacgcaggtgctcttc
gaggacgtcgcttccgaccccacactaccgcgcaccaagtccgtccgctgcgccgcctgc
ggccacggcgaggctgtcttcttccaggcgacggcgaggggcgaggaaggcatgacgctc
ttcttcgtctgctgcaaccccagctgcggccaccgatggagagactga

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