Panicum hallii (Hall's panicgrass): 112902295
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Entry
112902295 CDS
T07366
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112902295
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112902295
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
112902295
NCBI-ProteinID:
XP_025827087
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Position
1:complement(5974295..5976147)
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AA seq
443 aa
AA seq
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MERLRWSRPGSLLLVAAAFLASAAASSAGIADLDEHWQKRKELAEASAREAYRPDPYNVT
NSFNIAVHRATSLRREMGEKKKKKKNKSGGPCKATNPIDKCWRCRKDWATDRQRMARCAR
GFGHLATGGLGGKIYIVTDPGDVDVLNPRPGTLRWGAIQTGPLWITFARSMIIELTQELL
VSSDKTIDGRGAQVHIANGGGITVQFARNVIIHNLHVHDVKHTAGGMMRDSPTHTGPRTK
ADGDGISLFGATNVWIDHISMSNCEDGLVDVVQSSTGVTISNCHFTNHNDVMLFGASDSY
PQDQVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSNAPTIISQGNR
YIAPPNIAAKVITKHYADEGVWKNWVWHTENDLFMNGAVFQPSGGAVPRKVKKDDWVKPK
PGSYVTRLTRNSGTLECSPGKPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctccggtggagccgccccggctcgctcctcctcgtcgccgcggcgttcctg
gcgtccgccgccgcgtcgagcgccggcatcgccgacctcgacgagcactggcagaagcgc
aaggagctggccgaggcgtcggcgagggaggcgtacaggcccgacccctacaacgtcacc
aacagcttcaacatcgccgtccaccgggcgaccagcctgcgtcgcgagatgggggagaag
aagaagaagaagaagaacaagtccggcgggccgtgcaaggcgacgaacccgatcgacaag
tgctggcgctgccgcaaggactgggcgacggaccggcagcggatggcccggtgcgcccgg
ggcttcgggcacctggccaccggcgggctcggcggcaagatctacatcgtgaccgacccc
ggcgacgtcgacgtgctgaacccgcggcccggcacgctccggtggggcgccatccagacg
ggcccgctgtggatcaccttcgcgcggtccatgatcatcgagctcacgcaggagctcctg
gtgagcagcgacaagaccatcgacgggcgcggcgcgcaggtgcacatcgccaacggcggc
ggcatcacggtgcaattcgcgcggaacgtgatcatccacaacctccacgtgcacgacgtg
aagcacaccgccggcgggatgatgcgggactcgccgacgcacacgggcccccgcaccaag
gccgacggcgacggcatctcgctgttcggcgccaccaacgtgtggatcgaccacatctcc
atgtccaactgcgaggacgggctggtggacgtggtgcagagctccacgggggtcaccatc
tccaactgccacttcaccaaccacaacgacgtgatgctcttcggcgccagcgactcgtac
ccgcaggaccaggtgatgcagatcaccgtcgccttcaaccacttcggcagggggctcgtg
cagcggatgccgcgctgccgatggggcttcttccacgtcgtcaacaacgactacacgcac
tggctcatgtacgccatcggcggcagcaacgcaccaaccatcatcagccagggcaaccga
tatattgcaccgccaaacatagcagccaaagtgatcaccaagcactacgccgacgagggc
gtgtggaagaactgggtgtggcacacggagaacgacctcttcatgaacggcgccgtcttc
cagccgtccggcggcgcggtcccgaggaaggtgaagaaggacgactgggtcaagcccaag
ccaggctcctacgtcaccaggctcacccgcaactccggcaccttggagtgcagccccggc
aagccgtgctga
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