Panicum hallii (Hall's panicgrass): 112902306
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Entry
112902306 CDS
T07366
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112902306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112902306
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112902306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
112902306
NCBI-ProteinID:
XP_025827102
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All DBs
Position
8:27021393..27038002
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AA seq
1129 aa
AA seq
DB search
MASPEQHRPRQPAPAPSFAAQNPAAQGLPGAGALPGAFANLQISRGAAPPPGAPPRALTP
QQAPPAFAAARPGPPPSAAAAAARPAFPGSPPAPPFVRAPTAAAAPSAASPFGGPPGAVS
QAPPPLGGPPGAASQQPPPFGGPAGAASRVPPPFGGPPSAASQASPPFGGPPAAVSQASP
LLGAPPAATSQGPPPFGGPSIAASQVPPFRGPRGSQPPSFGGPPAVALQPAPPMFGGQRP
AFPSQPGPTAATSSQPVPPSFGPPQQPPPPFSGQTQFGGPRSRGQPPFAAQSAPVAQQLP
FMGPPRANAPAFGPPSWQTQGTGSGAMQPPMGMPGIPGMQPNTLGPLGTPTIPYSPHAGT
QVSTPSKIDPTQIPRPMTEASVIIYDTRQGGQATVPPAASSEFIVKDTGNCSPRLMRCTI
NQIPCTGDLLTTSGMPLALMVQPFALPHPSEEPIQLVDFGEMGPIRCSRCKAYINPFMRF
VDQGRHFICNLCGFRNDTPRDYMCNLGPDGRRRDADDRPELCRGTVEFVATKEFLVRDPM
PAVYFFLIDVSMNAIETGATAAACSAIAQAISDLPEGPRTMVGIATFDSAIHFYSLKRAQ
QQPLMLIVPDVQDVYTPLQTDLILPISECRENLEQLLESIPNMFENNRVADSAFGAAMKA
GFLAIKSTGGKLLVFQSVLPSLGVGSLSAREAEGRANVTTGDKEAHKLLQPVDNTLKTMA
LEFAEYQVCVDVFLTTQSYVDIASISVVPQTTGGRVYYYYPFSALSDPAKLFNDLRWNIS
RPQGFEAVMRVRCSQGLQVQDYFGNFCKRVPTDIDLPAIDSDKTVMVTFRHDDKLQENQE
CGFQCALLYTTVYGQRRIRVINLSLSCTSLLSNLFRYADLETQFACFLKQAANGIPTSPL
PRIRDEATNTCINILQSYRKHCASVTSSGQLILPEALKLLPLYTLALVKSVGLRTDGRLD
ERSYWMSLVSSISVVLAVPLVFPRLIPIHDLTSRADDESLIPGPLMLNSENVQEDGVYLL
ENGEDGLIYVGNMVNPATLEQIFGVSSLAALPVQLVLEQFENELSRKVNEIVNEIRRQRC
SYLRLRLCRKGEPSGDFFRSFLIEDKAPGVFSYVEFLVHVHRQIQSKMT
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccggagcagcaccggcctcggcagccggcgccggcgccgtcgttcgccgcg
caaaaccctgccgcgcagggcctgccgggggcgggggcgctcccgggggcgttcgccaac
ctccagatctcccgcggcgcggccccgccgcccggcgcgccgccgcgcgcgctcacgccg
cagcaggcgccgcccgccttcgccgccgcgcgcccgggtcctccgccttcggccgccgcc
gccgcggcccggcccgccttccccggcagcccgcccgcgcctccgttcgtgcgggcgccg
acggcggcggcggcgccgtccgccgcgtcgcccttcggcgggccgccgggggcggtgtcg
caggcgccgcctccgttgggcgggcctccaggtgccgcgtcgcagcagcccccgccgttc
ggcgggcccgccggggcggcgtcccgggtgccgccgccgttcggaggccctccttccgcg
gcgtcgcaggcgtctcccccgtttgggggccctcccgcagcggtgtcgcaggcgtctccg
ctgcttggggcccctcccgccgcgacgtcacaggggcctccgccgttcggcggcccctcc
atcgcagcgtcccaggtgccgccgttccgtggcccccgtggttcacagcctccgtcgttc
ggtggtcctccagcagtggcgttgcagccggcaccaccaatgttcggcgggcaacggccg
gcattccccagccagcctgggccgacggcggcaacttcatcgcagccagtgccacctagc
tttgggcctccacagcagcctccgccaccattcagtgggcagacacagtttgggggtcca
cggtcaagggggcagcctccctttgctgcacaatcagcaccggtggcacagcaactgcca
ttcatgggaccacccagggcaaatgccccggcatttgggcctccgtcatggcaaactcag
ggaactgggtctggtgctatgcagccacctatgggaatgccaggcattcctgggatgcag
ccaaacacactaggaccccttggcaccccgactataccgtattctccacatgctggaacc
caggtctccaccccgtccaaaatcgatcctactcaaattccccggccaatgactgaagca
tcagtcatcatttatgacacccgtcaaggtggccaagcaaccgtccccccggctgcatct
agcgaatttattgtgaaggacactgggaactgtagccctcgtttaatgcggtgcactata
aatcagataccttgtactggtgatctcttgacaacgtcgggcatgcctttagctctgatg
gttcaacctttcgctcttcctcacccatctgaggaacctattcagcttgtggactttggg
gagatgggacccattcggtgttcacgttgcaaagcgtacataaatcctttcatgagattt
gttgatcaagggaggcatttcatctgtaatttatgtggatttagaaatgatactcctagg
gactacatgtgcaacttagggcctgatggtaggcgacgcgatgctgatgacaggcctgag
ttatgtagaggaacagttgaatttgttgctacaaaggaatttctggttcgtgatccaatg
cctgctgtatacttcttccttattgacgtctccatgaatgctatagaaactggtgcaact
gctgcagcttgcagtgctattgcccaggctatttcagatctgccggaaggtcctcggaca
atggttggaattgccacgtttgattctgctattcacttctacagtcttaaacgtgctcag
cagcagcctttgatgctcatcgttcctgatgttcaagatgtatatacacctcttcagaca
gatcttattctcccaatatccgagtgccgggagaatctggagcagttactagaaagcatc
ccgaacatgtttgagaataatagggttgctgattctgcttttggagcagctatgaaggct
ggcttcctggcaattaaatctactggtggaaaacttcttgttttccaatcagtgctgcca
tcgcttggggttggttctttatctgctagggaagctgaaggtagagcaaacgttacaact
ggtgacaaggaagcccataaactgttgcagcctgttgataataccctcaagacaatggcg
ctagaatttgctgaatatcaggtctgtgtggatgtattcctcaccacacaatcctatgtt
gatattgcttctatatctgttgtgccgcagactactggtggtcgggtctactactactat
ccattttctgctctttcagatccagccaagctcttcaacgatcttagatggaatatcagt
agaccccagggttttgaggctgttatgcgggtcaggtgcagtcagggtctccaagttcag
gactattttggcaatttctgcaagcgtgttcctactgacattgatcttccagcgattgat
tcggacaaaactgtgatggtgacatttaggcatgatgacaagttacaagaaaatcaggaa
tgtggcttccagtgtgcgcttctctatactactgtatatgggcaaagaaggatcagagta
ataaacctctcactttcatgcacaagtttgcttagcaaccttttccggtatgctgatttg
gagacacaatttgcttgcttcctgaagcaagctgctaatggcatcccgacatctccacta
ccccgtatccgggatgaagcaacaaatacatgcataaatattctgcaatcttaccgtaaa
cactgtgcgtctgtaacctcatcggggcaattgattctcccagaggctctaaaactgctg
cccttgtatactttagcattggtcaaaagtgtaggcttgagaaccgatgggcgtttggat
gagcgttcctattggatgtcccttgtctcctccatttctgtagtactagctgttccgttg
gtcttcccgagattgattcctatccatgatctcacatcaagggctgatgatgagtccctt
atacccggtccccttatgctcaatagtgaaaatgtacaagaggatggggtctatttattg
gaaaatggagaggatggtctaatttatgtaggaaatatggtaaatccagccaccctggaa
caaatattcggcgtctcttctttggctgcattaccagtccagttggtattggagcaattt
gagaacgagctctccaggaaggttaatgaaattgtaaatgaaataagacgccagagatgc
tcgtacttgaggctaaggctatgcagaaagggcgaaccatctggtgatttcttccgatca
tttttgatagaggacaaggcacctggcgtcttctcctatgtcgagttccttgtgcacgtg
cacaggcaaatccaaagcaagatgacgtga
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