Panicum hallii (Hall's panicgrass): 112902328
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Entry
112902328 CDS
T07366
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00061
Fatty acid biosynthesis
phai00071
Fatty acid degradation
phai01100
Metabolic pathways
phai01212
Fatty acid metabolism
phai04146
Peroxisome
Module
phai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112902328
00071 Fatty acid degradation
112902328
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112902328
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phai01004
]
112902328
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112902328
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112902328
Lipid biosynthesis proteins [BR:
phai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112902328
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of breast milk
112902328
Exosomal proteins of breast cancer cells
112902328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
112902328
NCBI-ProteinID:
XP_025827137
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Position
8:complement(1952316..1962699)
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AA seq
694 aa
AA seq
DB search
MDAAQRRVRAVSAHLQPPPAPAAGRGLAANPTAGEYAHAQGYSVVLPEKLQTGKWNVYRS
AHSPLSLISRYPGNPDIGTLHDNFAYAVETFRDCRYLGTRIRADGTIGDYKWMTYGEAST
SRTAVGSGLIYHGIPKGARIGLYFINRPEWIIVDHACASYSYVSVPLYDTLGPDAVQFIV
NHATVEVVFCVPQTLSILLSFIAQMPCVRLIVVVGGDDAKMPSTPVTTGVEIITYSRLLI
QGKSSPQPFRPPKPEDVATICYTSGTTGTPKGAVLSHGNFIANVAGSSLNIKFYPSDVYI
SYLPLAHIYERVNQVALLHCGVAVGFYQGDNLKLMDDLAVLRPTVFASVPRLYNRIYAAI
TNAVKESGGLKEKLFRTAYNAKRQAILTGRNPSPMWDKLVFNKIKARLGGRVRLMSSGAS
PLSADVMEFLRICFGGEVIEGYGMTETSCIISAMDIGDKSIGHVGSPISSCEVKLVDVPA
MNYTSDDQPYPRGEICVRGPTIFRGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKII
DRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSFNSSLVAVVAVEPEVLKAWAA
SEGIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEFAKAVSLVAEPFTLENGLLTP
TFKVKRPQAKTYFAKEISDMYAELRETETARPKL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcccagcgccgggtccgcgcggtctccgcccacctccagccgccgccggcg
cccgccgcgggccgcggcctcgccgccaaccccaccgccggcgagtacgcccacgcgcag
ggctacagtgttgttctccctgagaagttgcaaactgggaagtggaacgtgtaccggtcc
gcacattcgcctctaagtttgattagtagatatcctggcaatccggacattggaacgctg
cacgataattttgcgtatgcagttgaaacttttagagattgtagatatctgggaacaaga
atcagagcagatgggacaattggagactacaaatggatgacgtatggagaagctagcaca
agcaggactgcagtaggttctggccttatttatcatggaatacctaaaggtgcacgcatt
ggtttgtattttataaacaggcctgagtggattatagttgaccatgcttgtgcttcatat
tcatacgtatctgtgccactttatgatactcttggtccagatgctgttcagttcattgtg
aaccatgcaactgtggaagtcgtattctgtgtgcctcaaacactaagcattctgttaagt
tttatcgctcaaatgccatgtgttcggcttatagtggtagttggtggagacgatgcaaag
atgccttcaactcctgtaactactggagtggaaatcataacttactccaggttactcatc
cagggaaagtctagtcctcaaccttttcgtcctccaaaacctgaagatgttgccactatc
tgttacactagtggcactactggcacgccaaagggagctgttctttctcacgggaacttt
attgcaaatgtagcaggatcaagcctgaacattaagttttacccctctgatgtgtatatc
tcatatctacctttggctcacatctacgagagggttaaccaggttgccttgctgcactgt
ggtgttgccgttggattctaccaaggggataatttgaagctgatggacgatttggctgtt
ttgagaccgacagtattcgcaagtgttccccggttatataacagaatttatgccgcaatt
acaaatgctgtgaaggagtctggtggcctgaaagaaaaattgtttcgtactgcatacaat
gccaagaggcaagcaatccttacagggcgaaatccatccccaatgtgggataagttggta
tttaacaaaataaaagctaggcttggtggacgcgtgagacttatgagttctggtgcttct
ccactgtcagcagatgtcatggaattcctaagaatatgcttcggtggtgaagttattgaa
ggctatggaatgacagagacatcttgtatcatatctgcaatggatattggtgataaatca
attggtcatgttggatccccaatttcatcttgtgaggtgaaacttgtggatgtcccagca
atgaattatacttctgatgaccaaccatatcctcgtggagaaatttgtgttagaggaccc
acgatattccgtggttactacaaagatgaagtacaaacaagagaagtcattgatgaagat
ggttggttgcacactggagacataggtctgtggttgcctggagggcgtctaaagattatt
gataggaaaaagaacattttcaagttagctcaaggagaatacatagctccagagaagatt
gaaaatgtctatgccaaatgcaagttcattgcccaatgctttatatatggtgatagtttc
aactcttccctagttgctgttgttgcagttgaaccagaggttttgaaggcttgggctgcg
tctgaaggaatccagtacgaagacttaaggcagctttgtgctgatcctagagcaagagct
gctgtcctggctgatatggattctattggaaaggaagcacagctaagaggttttgaattt
gctaaagctgtttcgcttgttgctgaaccattcacattggagaatggtctcctcacccca
acattcaaggtcaaaagaccacaagctaagacatactttgcaaaagaaatatcagatatg
tatgcagagttgagggagacggagacagctaggccgaagttgtaa
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