Panicum hallii (Hall's panicgrass): 112902358
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Entry
112902358 CDS
T07366
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112902358
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
112902358
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
112902358
NCBI-ProteinID:
XP_025827183
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Position
8:complement(39185877..39216976)
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AA seq
582 aa
AA seq
DB search
MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEIYTDEPNFVKDNSGQSRLAGSILTSI
ESGYSMSHQRTLDKGKDEISQIVNNLHVSGGDTIIKRALHFYELALDRNFTRGRRTTHVA
AACLYIACRQSKKAYLLIDFSDYLQISVYVLGAVFLQLCQVLLLSDHPFVQKLIDPSLFI
HRFTQRLLGGRDNAVSDTALRIIASMKRDWMQTGRKPSGLCGAALYIAALSHGYNYTKAD
IVSVVHVCEATLTKRLIEFENTDAGSLTIEEFLATADECNLEPVPKCSLKSGEVLCKHKD
NKGSVHFAHGLCEKCYNKFTKLSGGLEGGCDPPAFQRAEKQRLEAAKRAEDAAAAKEAVL
EESLCDTQNSDVENTITPSKGISGDKSSAVASEECTNDSILSKDPEGGGENCEGDADPES
LSDIDDVEVDWYLHNEEETQYKKIIWEEMNKEYLEEQAAKEALAAELAARGVVVEEGKKK
KRRRNEDTKSSKPAETPAEATYNMLKRKQGLGSKVSAGAVGELYKTKDEDGSAHKKEEMD
FDAQYGQDDADGETFDHGYYSYDGYDDDGTGVYNGIDDFDFN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtttattgtactcactgtgctgattactgcccctccataaaggaccctgacaaagga
tacatatgctgtggtacatgtggaaaggttcttgatcaggaaatatacactgatgagcct
aattttgttaaagataactcggggcagagccgcttggctggaagtattctgacaagcatt
gagtctggatattcaatgtcccatcaaagaaccttagacaaagggaaggatgagattagt
cagattgtcaataacttacatgtcagcggtggagatactatcattaagagggctcttcac
ttctatgagctagctcttgaccgtaattttacaaggggtcgtagaacaacacatgttgca
gctgcttgcctttacattgcctgccggcaaagtaaaaaagcttatcttcttatcgatttc
tccgactatctgcaaataagtgtttatgtcctaggtgctgtttttctccaactttgccaa
gttttgctactctcagatcatccatttgttcaaaagcttatagatcccagccttttcatc
catcgttttactcaacgtttgctggggggaagggataatgctgtatcagacacagcttta
cgcattatagctagcatgaagcgagactggatgcagactggtaggaagccgagtggatta
tgtggtgcagcattatacattgctgcactctctcacgggtataattacaccaaggcagat
attgtttctgttgtgcatgtgtgtgaagccactctaactaagcgattgatagagtttgaa
aatacagatgctggcagcttaacgattgaagaatttctggcgacagctgatgaatgtaat
ctagagcctgttccaaaatgttcactcaagtctggagaagttctttgcaagcacaaggat
aataaaggttctgtgcattttgctcatggactgtgtgaaaaatgctacaacaagttcact
aaactgtcgggtggactagaaggtggttgtgaccctccagcattccaacgagctgaaaag
caaagacttgaagctgctaaaagggctgaagatgctgctgcagctaaggaggcagttctg
gaagaatctctttgtgatacacagaattctgatgttgagaataccataactcctagtaag
ggtataagcggagataaatcttcagcagttgcatctgaggaatgcacaaatgactctata
ctgtccaaagatcctgaaggaggaggtgaaaattgtgaaggcgatgctgatccagaaagc
ctttctgatattgatgatgtagaggttgattggtaccttcacaatgaggaagaaacacaa
tataaaaagattatctgggaggaaatgaacaaagagtaccttgaggaacaggcggcaaag
gaagctttggcagctgagttggcagctagaggtgttgttgtggaagagggaaagaagaaa
aaacgaagacgtaatgaagacaccaagagctcaaaacctgctgaaacaccagcagaagca
acatacaacatgctaaaacgaaagcagggacttggttcaaaggttagtgcgggagctgtt
ggcgaattatacaagactaaagatgaagatggcagcgcgcataagaaagaagagatggat
tttgacgcacagtatgggcaggacgatgctgatggtgaaacattcgatcatggttactac
agctacgatggttatgacgacgatggcacaggagtctacaatggcattgatgattttgat
ttcaattag
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