Panicum hallii (Hall's panicgrass): 112902439
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Entry
112902439 CDS
T07366
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00520
Amino sugar and nucleotide sugar metabolism
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112902439
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
112902439
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
CBP_BcsN
Motif
Other DBs
NCBI-GeneID:
112902439
NCBI-ProteinID:
XP_025827302
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Position
8:complement(6034629..6040696)
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AA seq
676 aa
AA seq
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MGSMEGLSRTVIRFMLLFCIVCKCLASDLEATQKATLKIDASPKLARKIPDTLLGVFFEE
MGRGGAGGLWAELVSNRGFEAGGTNTPSNIDPWLIIGDESSIFVETDRTSCFSQNIVALR
MEVLCNDCPAGGVGIYNPGFWGMNVEDGKTYNLVMYVKSAETVPLTVSLTSSDGLQNLAS
VPIMVAGKSKWIKVEEKFVAKGTDRTSRLQITSKKKGVVWFDQVSLMPADTYKGHGFRDE
LVSMLLDLKPRFLRFPGGCYVQGSWLRNAFRWRESIGPWEERPGHFGDCWNYWTDDGLGY
FEFLQLSEDLGAAPIWVFNSGLSYNDEVDTAAIAPFVKDVLDSLEFARGSANSSWGSLRA
AMGHPEPFPVKYAAIGNEDCGKKFYNGNYLKFYNAIREAYPDIQLISNCDGSSGPLDHPA
DLYDFHVYADAKTLFSMKNTFDKTSRTGPKAFVSEYAVWKTDAGRGTLLASLAEAAFLTG
LEKNSDVVEMACHAPLFVNDDIEKKWNPDVIVFNTWQHYGTPSYWMQVLFRDSSGAIVHP
TTISSSRSGNSSLAASAITWQDSDNSSFLRVKIVNFESVAVQVTICTTGLQASIDVLRST
ATVLTSSNVMDENSFSNPNKVSPVKSQLFEAGAHMQVTLAPHSFTSFDLALAPSKLVTLA
GRVNKYLMSELWDTQV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatggaagggctttctcgtacggtaatccgcttcatgctccttttctgcata
gtctgcaaatgtctggcatcagatttggaggcaacccagaaggcaaccctcaagatcgat
gcctcgccaaagcttgctcgaaagatccctgatacactacttggagtattttttgaggag
atgggccgtggaggtgctggtggactatgggctgaacttgttagtaacagaggtttcgaa
gcaggaggcaccaatactccatcaaacattgacccatggctcattattggagatgaatct
tccatttttgtggagactgatcgtacatcatgtttcagtcaaaacattgttgctttaagg
atggaggtcctctgcaatgactgtccagctggtggtgttggcatttacaacccaggtttc
tggggcatgaacgtagaagatggaaagacatacaatctagttatgtacgtgaagtcggct
gaaaccgtacccttgacagtttcactaacgagctctgatgggttgcaaaatctggcttca
gttccgataatggttgccggcaaatcgaaatggataaaggtagaggagaagttcgttgct
aaaggaaccgatagaacctcaaggcttcaaataacatctaagaagaaaggagttgtgtgg
tttgaccaagtatcactcatgcctgcagacacatacaaggggcatggtttccgcgacgaa
cttgtatccatgcttttggatttaaaaccacgattcttaagatttcctggaggttgctat
gtgcaaggaagctggctaagaaacgcattcaggtggagagagtctattggtccttgggaa
gagaggcccggacacttcggagattgttggaattactggactgatgatggccttggatat
tttgaatttctccagctttctgaggacctgggtgctgccccaatctgggtattcaacagc
ggattgagctacaatgatgaagttgatacagctgctattgccccttttgtaaaggatgta
ttggacagcctagaatttgcaagggggagtgcaaattcatcatggggctctcttagagct
gcaatgggacaccctgaaccgttcccagtcaagtatgctgcaattggaaatgaagactgt
gggaaaaagttttacaatggtaattacctcaagttttacaatgctataagagaggcatat
ccagacattcaactgatttcaaactgtgatggctcatctggaccacttgatcatccggct
gatttatacgatttccatgtctatgctgatgcaaagactctgttttccatgaagaacaca
tttgacaagacatcgcgtactggacccaaggcttttgttagcgagtatgcagtttggaaa
actgatgcaggtagaggaactcttcttgcttcactggcagaagctgctttcctcactggg
ctggagaagaatagtgatgttgttgagatggcttgccatgctccactattcgtaaatgac
gatattgagaaaaagtggaacccagacgttattgtcttcaatacctggcaacattatggg
acccctagttactggatgcaggtgcttttccgtgattctagcggtgctattgttcatcca
acaacgatcagttccagcaggtctggtaatagttctctagcagcatctgcaattacatgg
caggattcggacaatagctcattcttaagagtaaagattgtaaactttgaatctgttgct
gttcaagtcacaatctgcacgactggacttcaggctagcattgacgtgctgcgatcgacc
gccactgttctcacatctagcaatgtgatggatgaaaattctttcagtaacccaaacaag
gtctcgccggtcaagagccagctttttgaagcaggagcacatatgcaagtcacactggct
cctcactcattcacatcctttgatcttgcgctggcgccgtccaaacttgtcacgttggca
gggagagtcaacaaatacttgatgtctgaactgtgggatacccaagtgtga
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