KEGG   Panicum hallii (Hall's panicgrass): 112902512
Entry
112902512         CDS       T07366                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112902512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112902512
Spliceosome [BR:phai03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112902512
 Complex B
    112902512
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 112902512
NCBI-ProteinID: XP_025827420
LinkDB
Position
8:complement(42659358..42664785)
AA seq 595 aa
MAEYDERYEGNGGPAPGDAGAHAQAEYGAAPPAAGAGSPPAAAKPTGFSDHADGRASQPQ
HETQLHDSGSSKSRERDRERDKGKDRERDRDRGRERERDRGRDKDRERGDRDRDRDRHHR
DRRERSEKREHRDRSDDRDRHRDDRDRHRSHDSERRRDRERDGHRRHRSRSRSPSKSRDR
DRRSRSRSRSRSKSKRVSGFDQAPPQPTMPIAAAGAVPGQLPGVTPPIPGMFPNLYNLGQ
INPLVIQPQAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLN
VYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPN
LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNS
KGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGANQPRPEQDSVLIQAQQQVQM
QKLVYQVGGALPTKVVCLTQVVTADELRDDEEYEDIVEDMREEGRKYGNLVKVVIPRPDP
SGAPVAGVGKVFLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQYDG
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggccgagtacgacgagcgctacgagggcaacggcggccccgcccccggggacgcgggc
gcccacgcccaggccgagtacggcgccgctccccccgccgccggcgccggctcaccgccc
gccgcggccaagcccaccgggttctccgaccacgccgacggccgcgcctcccagccccag
cacgagacacagttgcatgacagtggttcctcaaaatcccgagaaagggacagagaacgt
gataagggcaaggacagggagcgcgacagggaccgtggccgagagagggagagggaccgg
ggcagggataaggaccgcgaaagaggtgacagggacagggatcgtgatcgccaccacagg
gatcgccgcgagcgtagcgagaaaagggaacaccgtgatcgttccgatgatcgtgaccgc
caccgtgatgatcgtgaccgtcacaggagccatgattctgaaaggagaagagatcgtgaa
agagatggccaccgtaggcatcggtcgcgctctcgctccccgtctaagagccgtgatcgt
gaccgaagatctagatctcgttcacgctctcgttcaaagagcaagcgtgtgagtggattt
gaccaagcaccgccacaaccgacgatgcctatagctgctgctggtgctgttcctggtcag
ctgcctggagtaactcctcctattccagggatgtttccaaacttatataatttgggacag
atcaatccccttgttattcaaccacaagccatgacacaacaggctactcgacatgctcgg
cgtgtgtatgttggtggacttcctccaactgctaatgagcagactgttgccatattcttc
aatggagttatggcagctattggaggaaacacagctggtccaggtgatgctgttcttaat
gtctacataaaccatgacaagaaatttgcttttgttgagatgagatctgtggaagaagca
agcaatgcaatggccttagatggcataatgttcgagggagcaccggtgaaggttagaagg
cccacggactataatccttccctagcagctgcgctgggcccaagccagccaaaccccaat
cttaatcttgctgctgttggcttaacccctggctctgctggaggattagaaggtccagat
cgcatttttgtgggtggactaccctattacttcactgaggcccaagtgcgggagttgctc
gaatcctttggtcctctgcgtggatttgatcttgtgaaggatagggaaactggtaactcg
aagggttatgcattctgtgtctaccaggatcttactgttaccgacattgcctgtgctgct
cttaatggcatcaagatgggagacaagacccttactgttaggcgggcgaaccaaggagct
aatcagcctaggccagagcaagacagtgtcctgattcaggcacaacaacaggtgcaaatg
cagaaactcgtgtaccaggttggaggtgcccttccaacaaaagttgtatgcctgacacag
gtagtcacagcagatgaactgagagatgatgaggaatatgaggacattgtggaggacatg
agggaagaagggcgcaaatacggtaacttggtgaaagttgtaatcccacggcctgacccc
agcggtgctcctgttgctggagttgggaaggtgtttttggaatatgcagatgtggaagga
tcgaccaaggcgaagactggcatgcatgggaggaagtttggcgggaatcaggtggtggct
gtgttctaccccgaggacaagtttgctgcggagcagtacgacggatga

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