Panicum hallii (Hall's panicgrass): 112902658
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Entry
112902658 CDS
T07366
Name
(RefSeq) SEC12-like protein 2 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112902658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112902658
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112902658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
KNTC1_N
RMC1_N
PEP5_VPS11_N
DUF7165
Beta-prop_VPS8
CFAP43_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
112902658
NCBI-ProteinID:
XP_025827591
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Position
8:complement(41770382..41774260)
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AA seq
395 aa
AA seq
DB search
MAPRGGQSYGFPIYCAAWLPLGHILKPDPPAGDADADADASSAASPSSPPPPMAALGGGG
GEGRSGVPNKLVVAALDPAGEEAALSPEAVVEVKTKEEVPYRMAVHPRGDGVLCAFPNGC
RLYRWESQEGDEPRKLALEPDQEALADLKDVGLQLAVSFSGEGSILATGGEDGHLRVFKW
PAMESVLTEADTKTSIKDLSFSSDEKFLAVNRSSGPCRVWDLLSSEVVANLPREAGEIFG
FCRFSNKIDSSNILFITAMQGDYGKIISWNTTSWTRVGSKKITREAISAFAVSPDGSLLA
IGTIEGTIIVLGSKDMRTLITVKKAHLGIVTTLAFSQDSRTLLSTSFDSTARVTSVGSPK
GNGASVWPMLLVIILAILVYYCMQHKEELLAMLPR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgcggcggccagtcctacgggttcccgatctactgcgcggcctggctgccc
ctcggccacatcctcaaacccgacccgcccgccggcgacgcggacgcggacgcggacgcc
tcctcagccgcctccccctcctctccgccgcccccgatggccgcgctcggcggcggcggc
ggggagggccggagcggcgtgcccaacaagctcgtcgtggccgcgctggacccggcgggg
gaagaggcggccctctcccccgaggcggtggttgaggtgaagaccaaggaggaggtgccg
tacaggatggccgtccacccgcgcggcgacggcgtgctctgcgccttccccaatggatgc
aggttgtatcgatgggaatcacaggaaggagatgaaccacgtaagctagctttggagcct
gaccaggaagcattagcagatctaaaagatgtcggtttgcaattggccgtatcattcagt
ggagaaggttcaatacttgccaccggtggtgaggatggacatttaagggtcttcaaatgg
cctgccatggagtccgttctcacagaagctgatactaaaacatctattaaggatcttagt
ttcagttccgatgagaaatttcttgctgttaataggagcagtggcccatgcagagtgtgg
gatttgctgtcatctgaagttgtagctaatttgccaagagaagcaggagaaatattcgga
ttctgcagattctctaataagattgacagcagtaacatcttatttataacagcaatgcaa
ggtgattatgggaaaataatatcttggaatactacctcgtggacaagagttggatcaaag
aaaataactcgtgaggctatttcagctttcgctgtgtcgcctgatggttctcttcttgca
attggaacaattgaaggaaccattatcgtactagggtcaaaagatatgcgaacactcata
acagttaaaaaggcacatcttggcattgttactacgctcgccttctcccaggattccaga
acattgctgtcaacttcctttgactcaactgcaagggtgacatcagtcgggtccccaaag
ggtaatggtgcaagtgtatggcccatgctactagttatcattctagcaattttggtatac
tactgtatgcagcacaaggaagagcttctggcaatgttgccgcgttga
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