Panicum hallii (Hall's panicgrass): 112902670
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Entry
112902670 CDS
T07366
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112902670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112902670
03029 Mitochondrial biogenesis [BR:
phai03029
]
112902670
Membrane trafficking [BR:
phai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112902670
Atg1 complex
112902670
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112902670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112902670
NCBI-ProteinID:
XP_025827618
LinkDB
All DBs
Position
8:2320951..2326283
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AA seq
597 aa
AA seq
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MAAATGASESPMVEQVITEFFAKSLHIILESRSPYDSSRNFTRPSPPSSPLSGSQPRDRW
FNLALRDCPAALENFDLWRQSNLEPLVIDIVLLQRDNTKTTSAGAGRIIERWVIKYETSR
SVNSSGNGSKNGGKKSRSSSAQDHSLYRRAYNGSTVLFRSLYLVVRLFPAYHLFQELNSS
GRIRPLSLSHKISSFVEPFTRAEDAEMKHYAFAPIETLSGRLSLSVSYVPVLEVAAAPEP
TTPMATELIMDYVGSPTTDFLRKFNSLPSDGIAHASFTMNRRHSWSTEHGTGPSASPSRM
PADNSPTTYSHQLNTSSSAKKRDAVNEECYPSPPLSPSPSLSPSSYPRNPFFRYGSAPLS
ITTVRAGGGSSRLPPSPHRKDKQQCPFQNENLTRSPNDRSIITKDLVRLGEVQNEKSLQK
VLSFGKDDLVYFRGLKLTRTSSKLFIMDELDERELVFAWEDKDTIFDQLSRIDLSERENR
ESSQEAGGSLTRSPNAAIGSLMRILKNAPGLRERLLTAPGAPVPQEPSSLQRVVTEEHGR
VASSSALVPSALLRSRTAADALEELNRYKEIRESILTRGKGNTRDTKLEEKPADGDP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcaacaggcgcatcggagtcgccaatggtggagcaagtgatcaccgagttc
ttcgccaagagcctccacatcatcctggagtcgaggtcgccctacgattcgtcgcgcaac
ttcacacggccttccccgccgtcgtcgccgctgtccggcagccagccgcgtgaccggtgg
ttcaatctcgctctccgggactgccctgccgcacttgagaactttgacctgtggcgacag
agcaaccttgagcctctggtcattgacattgtcctcctgcaacgtgacaataccaaaacc
accagtgctggggccggcaggatcatcgaaaggtgggtgataaagtatgaaactagcaga
tctgtcaacagtagtggtaacggtagcaagaacggtggcaagaagtctaggagcagctct
gctcaggatcatagcttgtacaggagggcatacaatggctcaacagtgttattccggtca
ctatatctggttgtccggctctttccagcataccatctcttccaggagctcaattcatcc
ggaagaatccgtccactcagcctctcgcacaagatttcatcatttgttgagccattcacc
cgtgcagaggatgcagagatgaaacactatgcatttgctccaattgaaactctgtctggt
cgcttgagcttgtcagtttcatatgtgccagtgctggaggtagcagcagcaccagagcca
accacaccaatggcaacagagcttatcatggattatgttggaagccccactacagatttt
ctgaggaagtttaattccctaccttcagacggcattgcacatgcatcttttaccatgaac
aggcggcacagttggagcactgaacatggaactggaccatccgcatcaccatcacgtatg
cccgctgataattctccaacaacatattcacatcaacttaacacatcttcatctgcgaag
aagagagatgcagtaaatgaagagtgctatccatcgccaccgctgtcgccatcaccatcc
ctttcaccttctagctacccaagaaatcccttcttccgatatgggagtgctccattgagt
attaccacagtgagggctggtggaggtagtagcaggctgcctccttctccacataggaag
gataagcaacagtgcccatttcaaaatgaaaatctaacacgttcccccaatgatagatca
ataataacaaaggatttggtcaggctgggtgaggttcagaatgagaagtctttgcaaaag
gttttatcttttggcaaagatgatttggtatattttcgtggactaaagttgactcgaacc
tccagtaaacttttcatcatggacgaactagatgaacgagagttggtttttgcatgggaa
gataaagacaccatctttgatcaacttagcaggattgatctctctgaaagggagaaccgt
gaatcgagtcaggaagctggaggctcgttaacaaggtctcccaatgcagcaataggtagt
ctcatgcgcatccttaagaacgccccgggactcagggaaaggttactgacggcccctggt
gccccagttcctcaagaaccttcttcgctccagagggtcgtgactgaggaacatggcagg
gtagcatcaagctctgcattggtgccttccgcgctgttgaggtcaaggacggcagcagac
gcgctggaggagctgaacagatacaaggagattagggaatcgatactgactcgcggcaaa
gggaatacccgcgacaccaagctggaggagaaacccgcagatggagatccttag
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