Panicum hallii (Hall's panicgrass): 112903068
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Entry
112903068 CDS
T07366
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00906
Carotenoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112903068
Enzymes [BR:
phai01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
112903068
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
112903068
NCBI-ProteinID:
XP_025828061
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Position
8:39762536..39767120
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AA seq
586 aa
AA seq
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MPPLAARVHASPLLAPVIPTARPAARLRASSGPRGGGSVRRGALASEKPAAVAVAEKAGE
DRGGEQSPYDAIVVGSGIGGLVAATQLAAKGARVLVLEKYLIPGGSSGYYRRDGFTFDVG
SSVMFGFSDKGNLNLITQALKAVGRKMEVLPDPSTVHFHLPRDLSVLVHRKYEDFINELI
SKFPHEKEGILKFYGICWKIFNSLNSLELKSLEEPLYLFGQFFRKPLECLTLAYYLPQNA
GDIARNFIKDQALLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIA
TSLADGLVEKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTFGKLL
KDKELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPAGTDCHHFVLEDDWNNLEKPYGSIF
LSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRNEYEGKKEVVANEIIRRLEKKLFPG
LQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCVGDSCFP
GQGVIAVAFSGIMCAHRVAADIGLEQKSPVLDAGLLGLLRWLRTLA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcgccgcgcgcgtccacgcctcgcctctcctcgcccccgtcatccccacc
gcccggccggccgcgcgcctccgggcctcgagcgggccccgcggcggcggcagcgtgagg
aggggcgcgctggcctcggagaagccggcggcggtggcggtcgcggagaaagcgggcgag
gacaggggaggggaacagagtccgtacgacgcgatcgtggtcgggtcggggatcggcggg
ctggtggcggcgacgcagctggcggcgaagggcgcgcgggtgctggtcctcgagaagtac
ctcatcccggggggaagctccgggtactaccgccgcgacgggttcaccttcgacgtcggc
tcctccgtcatgttcggcttctccgacaagggtaacttgaacttgatcacacaagcgctg
aaagcagttgggcgtaagatggaagtcctgcctgacccttctaccgtccatttccaccta
cctcgggatctctctgtccttgtgcataggaagtatgaagacttcatcaatgaactgatc
agcaaattcccgcatgagaaggaagggatccttaagttctacggcatatgttggaagatc
ttcaattcattaaattcattggagctgaagtccctggaggagccactttatctttttggg
caatttttccggaagcctctagaatgcttaactctagcttattatttgccgcagaatgct
ggggatatcgctcgcaacttcataaaagatcaggcgctactctccttcatagatgccgag
tgtttcattgtgagcacagtcaatgccttgcaaacacccatgataaatgcaagcatggta
ttgtgcgataggcactttggggggattaattatccagttggtggcgttggtggtattgcg
acatccctggcagatggccttgttgaaaagggcagcgaaatccgttacaaggcgaatgta
accaatgtcattcttgaaaatgggaaagctgttggtgtgaggttatcaaatgggaaggag
ttctttgctaaaacggtgatatcaaatgccacaagatgggacacttttggaaagctcttg
aaagacaaagagcttccagaagaggagaaaaacttccaaaagaattatgttaaggcgcca
tcattcctttcaattcatatgggtgtcaaagcctcagtcttgcccgctggcactgactgc
caccattttgtacttgaggatgattggaataatttggagaagccttatggaagcatattt
ctaagtatccctacagttcttgatccatcattagctcctgaaggacatcatatacttcat
atatttactaccgcaggcatagaagactgggagggtctttcgaggaacgaatatgaaggg
aaaaaagaggtagtggccaatgagattatcagaaggcttgaaaagaagttgtttcctggt
ctccaagattcaatagtcctcaaagaggtaggctcaccaaaaactcaccgaagatttctt
gctcgaaatgatggtacatatggaccgatgccacggggtaaaccgaagggcttactggca
atgcctttcaacactacttcaatagatggcctttattgtgttggcgatagctgttttccc
gggcaaggtgtcattgccgtagcattctcagggatcatgtgtgctcaccgagttgctgca
gatattggactagagcagaaatcccccgttctagatgctggtcttcttgggctcctcaga
tggttgagaacacttgcatag
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