KEGG   Panicum hallii (Hall's panicgrass): 112903487
Entry
112903487         CDS       T07366                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04142  Lysosome
phai04144  Endocytosis
phai05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:phai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112903487
   04142 Lysosome
    112903487
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    112903487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112903487
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phai04147]
    112903487
Membrane trafficking [BR:phai04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    112903487
Exosome [BR:phai04147]
 Exosomal proteins
  Proteins found in most exosomes
   112903487
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW
Other DBs
NCBI-GeneID: 112903487
NCBI-ProteinID: XP_025828540
LinkDB
Position
8:335888..345783
AA seq 1709 aa
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVIRAAEEANVYNDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSTKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRSEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREY
TSKVDDLVKDKIESQNEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPMGGM
GMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq 5130 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggc
atcgccccgcagttcgtcaccttcacccatgtcaccatggagtcggagaaatacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacggcctatcaccgccgactctgcgctcatgaaccccaacaccagaatcctc
gcgctcaaagcccaaatacctgggacaacacaggatcaccttcaaatattcaatattgag
gctaagactaagataaagtctcatcagatgccggagcaggttgtgttttggaaatggatc
actcccaagttgttgggtttagtaacacaaacatcagtttatcactggtcaattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatctggcaaacaaccagatcatc
aactaccgatgcgacccagctgagaagtggcttgtgcttattgggattgcacctggtgcc
ccggagaggccacagctggtgaagggaaatatgcaacttttttctgttgatcagcagcgt
agccaggcacttgaagcccatgcagcatcttttgcatcatttaaggttgttggtaatgag
aacccatcaacccttatttgtttcgcctcgaagacaactaatgctggacaaatcacttca
aagttgcatgttattgaattgggcgcccagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacgaagcttggccttttgtttgtatatgatttg
gaaactgctgcagcagtttacagaaatagaattagtccagaccctatattcttgacagca
gaatcttcctcgactggtggattttatgccatcaacagaagagggcaggttttacatgcc
acagttaatgatgcaaccgttgtgccttttgtcagtggtcagttaaacaaccttgagcta
gctgtgaatcttgccaagagagccaatcttcctggtgcagagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacgaaatacaaggaagcagctgagctggccgcagaatct
cctcaaggcctcctgagaacacctgagactgttgcaaagtttcagagtgttcctgtgcaa
gctgggcaaacacccccactgttacagtactttggtacattgctaactcgagggaagctc
aacgcctttgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaacctt
ctggaaaattggttggcggaagacaagctagagtgcagtgaagaacttggagatcttgtc
aagactgtggacaatgatcttgccctaaaaatatacataaaggctagggcaacccctaaa
gttgttgcagcttttgctgaaaggagggagtttgacaagattcttatatactcaaagcag
gttgggtacactccagattatctcttccttctccagaccattttgcgtacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggaaggtggttgtccagtagattat
aatactattactgatcttttccttcagaggaatatgatacgggaggcaacagcttttttg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttggtgacatacccaaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgaccgccctcgtattgctcagctgtgtgaaaaggcgggcttgtacttgcgtgct
ctccagcattactcagagttacctgatatcaagcgtgtcatcgtcaatacccatgccatt
gagccacaggctcttgttgagttctttggcaccctgtcaagagagtgggccttggagtgc
atgaaggaccttctactggtcaatctgagggggaatcttcaaatcgttgtgcaggctgca
aaagaatactccgagcagctaggagttgatgcttgcataaaactatttgagcaattcaaa
tcttacgagggcctttactttttcttaggatcctatttgagctccagtgaggacccagaa
atccatttcaaatacattgaagcagctgccaggactggacagatcaaagaagtggaacgt
gtaaccagagagtctaacttctatgatgctgagaagacaaagaacttcttgatggaagca
aaactacctgatgcccgcccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtacacgaacaacatgcttcggtatattgaaggctatgtacagaaa
gtgaatcctgggaatgctcccttggtagtgggccaactactcgacgatgagtgccctgaa
gattttattaagggtttgattctctctgttcgttccctccttcctgttgagccactggtt
gatgaatgcgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agcgaaggtagccaagatgttcatgtccacaatgctcttgggaaaataatcattgacagc
aacaataatcctgagcatttccttactaccaacccattttatgactcgcgcgttgtgggt
aaatactgtgaaaagcgggatcctacacttgctgttgttgcttacaggcgtgggcagtgt
gacgatgaacttattaacgtcactaacaaaaactcattgttcaagctgcaagccagatat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcagctcattgaccaggtggtttcgaccgcattacctgagagcaagagcccggag
caagtgtctgctgctgttaaggctttcatgactgctgacctccctcatgaattgattgag
cttcttgaaaagattgttcttcagaattctgcgttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgcgatcaaggcggacccatcgagagtcatggactatgtgaacaga
cttgacaactttgatgggcctgctgttggggaagttgctgttgaagcacaattgtatgaa
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccgaagcatagaaagagctgaggagtttgctttccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagttacgtgaaggtttagtcagtgaagcaatcgag
tccttcatccgcgcagatgatgcggcacatttccttgatgtcatccgtgctgctgaggag
gccaatgtgtacaatgatttggttaagtatcttctgatggtaagacaaaaggcaagggag
cccaaagttgatggagaactcatctttgcatatgctaagattgatagactcagtgatatt
gaagagttcattcttatgccaaatgttgccaacctccaaaatgttggtgatcgtttgtat
gatgaagagctatatgaagctgcaaagatcatctatgccttcatctcaaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgtaag
gctaacagcacgaaaacatggaaggaggtctgctttgcttgtgttgatgcagaggagttc
cgtcttgcacagatatgtggtctaaatattattgtccaggttgatgacttagaagaagtg
agtgaatactaccagaatagaggatgcttcaatgaacttattgctctcatggagagtggt
cttggtcttgaacgtgcacacatgggcatcttcacagaactgggagttctgtatgctaga
taccgctctgagaagcttatggagcacatcaaacttttctccacccgtctcaacattcct
aagcttatccgggcttgcgatgaacagcaacactggaaagaacttacctacctgtacata
cagtacgatgaatttgacaatgctgccaccactatcatgaaccactctccagatgcctgg
gatcatatgcagttcaaggatgtttgtgttaaagttgcaaatgttgaactatattacaag
gcagttcacttctatttgcaagagcaccctgatctcatcaacgatatgctaaatgtgctt
gcgctccgtttggatcataccagagttgtagacataatgcgcaaggctggtcagctgcat
cttgtgaagccttatatggttgcagttcagagcaacaatgtctctgctgtgaatgaagcg
ttgaatgagctttatgttgaagaggaagactacgagagactccgggaatcagttgacatg
cacgataactttgatcagataggtcttgctcagaagcttgagaagcatgaattgcttgag
atgaggaggattgctgcctacatctacaagaaggctggcagatggaagcaatccattgct
ttatcaaagaaagacaacatgtataaggattgcatggagacatgctcgcagtctggtgac
cgtgaactatcagaggacttgcttgtctatttcatcgagcagggaaagaaagaatgcttt
gcatcttgcctcttcatttgttatgacttgatccggcctgatgttgcccttgagcttgca
tggatgaacaacatggtggactttgccttcccatatctcctgcagttcattcgtgaatac
accagcaaggttgatgatttagtcaaggacaaaattgagtcacaaaatgaggaaagagcc
aaagagaaggaggagaaagatcttgttgctcagcagaacatgtatgcccagctgcttcct
cttgctttacccgctccgccgatgcctggcatgggtggtccacctccgatgggtggaatg
ggcatgcctccaatgggtggaatgggtatgcctccaatgggtcctggtccgatgccagca
tttggaatgccgccaatgggaagctactag

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